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The map label for this gene is pduA [H]

Identifier: 218691114

GI number: 218691114

Start: 3396730

End: 3397062

Strand: Direct

Name: pduA [H]

Synonym: ECED1_3456

Alternate gene names: 218691114

Gene position: 3396730-3397062 (Clockwise)

Preceding gene: 218691113

Following gene: 218691115

Centisome position: 65.2

GC content: 48.65

Gene sequence:

>333_bases
TTGCTATTCCTCTGTGCACGTTTTCTTTCTATCGGAAATATTGAGGTCGTTATGCAACAAGAAGCATTAGGAATGGTTGA
AACGAAAGGTCTGGTTTCTGCAATTGAAGCTGCAGATACCATGGTGAAATCTGCCAACGTGACCCTAGTGGGTTATGAAA
AAATCGGCTCCGGCTTGGTGACTGTGATGGTTCGCGGCGACGTTGGCGCAGTGAAAGCCGCGACAGATGCGGGCTCCGCT
GCTGCGAGTAAAGTGGGAGAACTGGTCTCCGTACATGTTATTCCACGCCCACACATTGAGGTGGAAAAAATTCTACCGAA
GGCTATCGGTTAA

Upstream 100 bases:

>100_bases
GCAAAAGCAAGATAGTCCCACTGACGCGCAAAACATTTTGTCTGAATAACCTTAGCATTATGATAATTAAATAATTAATG
CACATGGGTGAATCCGTAGA

Downstream 100 bases:

>100_bases
TAACAATAAAGGATACTGATCATGAGAGATAATCTTGTTGAGCAGATTATATCTGACGTAATGAATAAACAAACCGATAT
CTCACCGGAAGCTAAAACAG

Product: putative propanediol utilization protein, polyhedral bodies (pduA-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLFLCARFLSIGNIEVVMQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDAGSA
AASKVGELVSVHVIPRPHIEVEKILPKAIG

Sequences:

>Translated_110_residues
MLFLCARFLSIGNIEVVMQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDAGSA
AASKVGELVSVHVIPRPHIEVEKILPKAIG
>Mature_110_residues
MLFLCARFLSIGNIEVVMQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDAGSA
AASKVGELVSVHVIPRPHIEVEKILPKAIG

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=86, Percent_Identity=68.6046511627907, Blast_Score=103, Evalue=2e-24,
Organism=Escherichia coli, GI87082105, Length=83, Percent_Identity=44.578313253012, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 11376; Mature: 11376

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLCARFLSIGNIEVVMQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLV
CCEEHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCEE
TVMVRGDVGAVKAATDAGSAAASKVGELVSVHVIPRPHIEVEKILPKAIG
EEEEECCCCCEEECCCCCHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLFLCARFLSIGNIEVVMQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLV
CCEEHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCEE
TVMVRGDVGAVKAATDAGSAAASKVGELVSVHVIPRPHIEVEKILPKAIG
EEEEECCCCCEEECCCCCHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]