Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is 218691112
Identifier: 218691112
GI number: 218691112
Start: 3394774
End: 3395271
Strand: Direct
Name: 218691112
Synonym: ECED1_3453
Alternate gene names: NA
Gene position: 3394774-3395271 (Clockwise)
Preceding gene: 218691111
Following gene: 218691113
Centisome position: 65.16
GC content: 54.82
Gene sequence:
>498_bases ATGTCTGCGAATGAGGCTTCACTCGACAACTGGATTAACGAGGCTATTGCCACGCAGTTACCGGAACTCCGGATGTCGCT GAGCCTGGAGGACAGTGAACTGCTGGCAAAGTTGGTCCGGGAAATAGCACAGTCCAGCAATGTATCGATCGTTTTTAGCC TAGTGGATGCCTGCGGTCAGCAGCGTTTTTTCTTCAGCATGGATAACGCCCTGCTGGTCAGCCATACCTTGGCACCACAA AAGGCCTGGACCGCGGTAGCTCTCAAAATGCCAACTCACGAACTGGCAACGCTGGTACAGCCGGGTGGTGATTTGTACGG CCTTGAGAAAGAAAAAGATATCTGCTGCTTCGGCGGTGGTTTTCCCTGCTGGTCGGGCAGGCGCTTACTAGGCGGCATCG GCATCAGCGGCGGCAGTGTTGAGGAAGATATGCTCATCGCCCGCCAGGCGATGGCGCAGTTTAGCGTTCTGCGTTATCCC CTCACAACAACCCGTTAA
Upstream 100 bases:
>100_bases CAACAACAAAGATCACTCGGTGATTGACGCTGCCGTGGTGGGTATCGTCGACTCGCTCGAACTTAACGGTTAATAGCGGC GCGTACGCTGAGGAATACTT
Downstream 100 bases:
>100_bases TTTTTTGCAGTCCATTTCAGGGGGCATCATGTCTTTAGCTTGTGTATTAGTGATTAATTGTGGTTCCTCATCAATGAAAT TCTCCGTCATTCCTCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSANEASLDNWINEAIATQLPELRMSLSLEDSELLAKLVREIAQSSNVSIVFSLVDACGQQRFFFSMDNALLVSHTLAPQ KAWTAVALKMPTHELATLVQPGGDLYGLEKEKDICCFGGGFPCWSGRRLLGGIGISGGSVEEDMLIARQAMAQFSVLRYP LTTTR
Sequences:
>Translated_165_residues MSANEASLDNWINEAIATQLPELRMSLSLEDSELLAKLVREIAQSSNVSIVFSLVDACGQQRFFFSMDNALLVSHTLAPQ KAWTAVALKMPTHELATLVQPGGDLYGLEKEKDICCFGGGFPCWSGRRLLGGIGISGGSVEEDMLIARQAMAQFSVLRYP LTTTR >Mature_164_residues SANEASLDNWINEAIATQLPELRMSLSLEDSELLAKLVREIAQSSNVSIVFSLVDACGQQRFFFSMDNALLVSHTLAPQK AWTAVALKMPTHELATLVQPGGDLYGLEKEKDICCFGGGFPCWSGRRLLGGIGISGGSVEEDMLIARQAMAQFSVLRYPL TTTR
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 17983; Mature: 17852
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANEASLDNWINEAIATQLPELRMSLSLEDSELLAKLVREIAQSSNVSIVFSLVDACGQ CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC QRFFFSMDNALLVSHTLAPQKAWTAVALKMPTHELATLVQPGGDLYGLEKEKDICCFGGG CCEEEECCCEEEEEECCCCCHHHEEEEEECCHHHHHHHHCCCCCEECCCCCCCEEEECCC FPCWSGRRLLGGIGISGGSVEEDMLIARQAMAQFSVLRYPLTTTR CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SANEASLDNWINEAIATQLPELRMSLSLEDSELLAKLVREIAQSSNVSIVFSLVDACGQ CCCHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC QRFFFSMDNALLVSHTLAPQKAWTAVALKMPTHELATLVQPGGDLYGLEKEKDICCFGGG CCEEEECCCEEEEEECCCCCHHHEEEEEECCHHHHHHHHCCCCCEECCCCCCCEEEECCC FPCWSGRRLLGGIGISGGSVEEDMLIARQAMAQFSVLRYPLTTTR CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA