| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is yeiT [H]
Identifier: 218690295
GI number: 218690295
Start: 2517764
End: 2519002
Strand: Direct
Name: yeiT [H]
Synonym: ECED1_2593
Alternate gene names: 218690295
Gene position: 2517764-2519002 (Clockwise)
Preceding gene: 218690294
Following gene: 218690296
Centisome position: 48.33
GC content: 51.33
Gene sequence:
>1239_bases ATGCCGCAACAAAATTATCTGGATGAACTCACTCCGGCTTTTACGCCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTT ATTATGTCATGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTC GTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAATAATGCCCTCGGTGCCGTTTGTGCCAGAGTGTGCCCGACGGAG AAATTATGCCAAAGCGGTTGTACACGTGCCGGTGTTGATGCTCCCATTGATATCGGTCGCTTACAGCGTTTTGTTACTGA TTTTGAACAACAAACTGGGATGGAAATTTATCTGCCCGGTACTAAAACGCTCGGCAAAGTCGCCATTATTGGCGCAGGTC CTGCCGGATTGCAGGCCAGTGTGACGCTGACAAACCAGGGTTATGACGTCACGATCTATGAGAAAGAAGCACAACCCGGT GGCTGGTTGCGTAACGGCATTCCGCAATTCCGGTTACCGCAATCGGTGCTGGATGCAGAAATCGCCCGTATAGAAAAAAT GGGCGTGACCATTAAGTGCAATAACGAAATCGGTAAAACACTCACCCTGGAGCAGCTGAAAGCGGAAAACCGCGCGGTAC TGGTCACCGTAGGGTTATCGAGCGGTTCCGGGTTATCGCTGTTTGAGCATAGCGACGTTGAGATTGCCGTCGACTTCCTG CAACGTGCACGACAGGCGCAAGGCGATATCAGCATTCCACAAAGCGCATTAATTATCGGCGGCGGTGATGTTGCGATGGA CGTAGCCAGCACGCTGAAAGTTCTCGGCTGTCAGGCGGTAACCTGCGTAGCGCGTGAAGAGTTAGATGAGTTTCCGGCAA GCGAAAAAGAGTTTACCAGCGCCAGAGAGCTGGGCGTTTCGATCATCGATGGATTTACACCAGTAGCCGTGGAAGGCAAT AAAGTCACCTTTAAGCATGTTCGTTTACCGGGCGAACTGACGATGGCGGCAGATAAAATTATTCTCGCCGTCGGTCAGCA TGCCAGACTGGATGCCTTTGCGGAGTTAGAGCCGCAGCGTAACACCATCGAAACGCAACATTACCAGACCCGCGACCCGC AAGTCTTTGCTGCTGGCGATATTGTTGAGGGTGACAAAACCGTGGTCTATGCAGTGAAAACCGGGAAAGAAGCCGCCGGG GCGATTCATCACTATTTAGAGGGAGCTTGCTCATGTTAA
Upstream 100 bases:
>100_bases CTTTCACAGTTTAAATTTCCCCACGCGCATAGCCTTAATATCAGCACGCAATATTTATTTAGCGTTCGCCTTAATTACTC ATAGCATTAAGGAAGATCAC
Downstream 100 bases:
>100_bases CGAAAGATCTTTCGATTACTTTTTGCGGCGTGAAGTTTCCCAACCCGTTCTGCCTTTCTTCTTCGCCGGTAGGCAACTGC TATGAGATGTGTGCCAAAGC
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTE KLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYLPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPG GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFL QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGN KVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQRNTIETQHYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAG AIHHYLEGACSC
Sequences:
>Translated_412_residues MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTE KLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYLPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPG GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFL QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGN KVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQRNTIETQHYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAG AIHHYLEGACSC >Mature_411_residues PQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEK LCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYLPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPGG WLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFLQ RARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNK VTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQRNTIETQHYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGA IHHYLEGACSC
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=437, Percent_Identity=32.0366132723112, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI237757300, Length=90, Percent_Identity=48.8888888888889, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1788468, Length=412, Percent_Identity=97.5728155339806, Blast_Score=825, Evalue=0.0, Organism=Escherichia coli, GI1788811, Length=446, Percent_Identity=32.5112107623318, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1789606, Length=442, Percent_Identity=31.447963800905, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI87082180, Length=450, Percent_Identity=29.7777777777778, Blast_Score=164, Evalue=8e-42, Organism=Escherichia coli, GI1789243, Length=398, Percent_Identity=29.1457286432161, Blast_Score=136, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71984108, Length=439, Percent_Identity=33.0296127562642, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17570289, Length=449, Percent_Identity=28.0623608017817, Blast_Score=145, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320030, Length=461, Percent_Identity=25.3796095444685, Blast_Score=123, Evalue=5e-29, Organism=Drosophila melanogaster, GI24640763, Length=434, Percent_Identity=31.1059907834101, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI18858217, Length=434, Percent_Identity=31.1059907834101, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI24665547, Length=443, Percent_Identity=27.5395033860045, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI24665543, Length=443, Percent_Identity=27.5395033860045, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI28574881, Length=443, Percent_Identity=27.5395033860045, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI24665539, Length=443, Percent_Identity=27.5395033860045, Blast_Score=134, Evalue=8e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 44296; Mature: 44165
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHH ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYLPG HHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC TKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPGGWLRNGIPQFRLPQSVLDAE CCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHH IARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFL HHHHHHHCEEEEECCCCCCEEEHHHHCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHH QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTS HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ARELGVSIIDGFTPVAVEGNKVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQR HHHCCHHHCCCCCCEEEECCEEEEEEEECCCCHHHHHCEEEEEECCCCCCCHHHHCCCCC NTIETQHYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGAIHHYLEGACSC CCCCCCCCCCCCCEEEEECCEECCCCEEEEEEECCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHH ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYLPG HHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC TKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPGGWLRNGIPQFRLPQSVLDAE CCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHH IARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFL HHHHHHHCEEEEECCCCCCEEEHHHHCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHH QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTS HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ARELGVSIIDGFTPVAVEGNKVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQR HHHCCHHHCCCCCCEEEECCEEEEEEEECCCCHHHHHCEEEEEECCCCCCCHHHHCCCCC NTIETQHYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGAIHHYLEGACSC CCCCCCCCCCCCCEEEEECCEECCCCEEEEEEECCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]