Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 218689648

GI number: 218689648

Start: 1865542

End: 1866375

Strand: Direct

Name: ydiA [C]

Synonym: ECED1_1905

Alternate gene names: 218689648

Gene position: 1865542-1866375 (Clockwise)

Preceding gene: 218689646

Following gene: 218689649

Centisome position: 35.81

GC content: 50.84

Gene sequence:

>834_bases
ATGGATAATGCTGTTGATCGCCACGTTTTTTATATTTCTGATGGTACGGCAATAACTGCGGAGGTATTAGGACACGCAGT
AATGTCACAATTTCCCGTCACTATCAGCAGCATTACGCTGCCGTTTGTCGAAAATGAGAGCCGTGCACGGGCAGTGAAGG
ATCAGATTGACGCAATTTATCACCAGACAGGTGTGCGCCCGCTGGTCTTCTACTCCATCGTGTTGCCGGAGATTCGCGCT
ATCATCTTGCAAAGTGAAGGCTTTTGCCAGGATATCGTTCAGGCGCTGGTTGCCCCGCTACAACAAGAGATGAAACTGGA
TCCAACGCCGATTGCTCATCGTACCCATGGCCTTAACCCTAATAATCTCAATAAATATGATGCGCGCATTGCGGCGATTG
ATTACACCCTTGCCCACGATGACGGTATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGC
TGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAATTTGGTATCCGCGCGGCAAATTACCCCTTTATTGCCGACGA
TATGGATAATCTGGTGCTGCCCGCGTCGCTCAAACCACTTCAGCACAAATTGTTCGGCCTGACTATCGACCCGGAACGTC
TGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGCCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTG
GAAGCGTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCT
CGATATCATGGGCCTTAGCCGCCGAATGTACTAG

Upstream 100 bases:

>100_bases
TTTAAGTTTCATTTTATAAACCAGACATAACGTTCTACGCTTCTGTGCGTTTTTAATTTATGCTTTCATAGAATTATGTC
TGCATCACGGGAAGAACAAA

Downstream 100 bases:

>100_bases
AGAACTAGTGCATTGGCTTACTTTTTTGTTATCATGCTAACCACCCGGCGAGGTGTGACACACCTCGCACTTGAAATCAG
CTGCGATTGGTTTATCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRA
IILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEV
EALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY

Sequences:

>Translated_277_residues
MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRA
IILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEV
EALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY
>Mature_277_residues
MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRA
IILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEV
EALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=277, Percent_Identity=100, Blast_Score=573, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 31211; Mature: 31211

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIY
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHH
HQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNP
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
NNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAAN
CCCCHHHCEEEEEEEEEECCCCCCCCCCCHHHEEEEEHHHCCCCCHHHHHHHHHCCEECC
YPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEV
CCEEECCCCCEEECCCCCHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY
HHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIY
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHH
HQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNP
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
NNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAAN
CCCCHHHCEEEEEEEEEECCCCCCCCCCCHHHEEEEEHHHCCCCCHHHHHHHHHCCEECC
YPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEV
CCEEECCCCCEEECCCCCHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY
HHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA