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The map label for this gene is yfeD [H]

Identifier: 218689335

GI number: 218689335

Start: 1530364

End: 1530732

Strand: Reverse

Name: yfeD [H]

Synonym: ECED1_1557

Alternate gene names: 218689335

Gene position: 1530732-1530364 (Counterclockwise)

Preceding gene: 218689336

Following gene: 218689334

Centisome position: 29.38

GC content: 37.94

Gene sequence:

>369_bases
ATGAATTATGCATTGATAATCGCTATTATAATATCGTTCCCCTGTGCATTATTATCAGTTTTCCTGGTATTAAAAGGCTG
GGCGCTAATAGGAGATGCAATGAACCACGCAATGTTTCCTGGCATAGTTCTAGCCTGGATTATAGGTATGCCGCTGGGAA
TTGGTGCATTTATTGTAGGACTGTCTTGTGCAATTGCAACTGGCTATCTGAAAGATAATAGCATCATAAAGAAAGATACC
ATTATAGGTATCGTTTTTTCAGGAATTTTTGTCTTGACTATCAACAGGCACAAGTCAGCGGATTACAGATATCATTATTA
CATTACGGTTTACTCTGCATGGTATCGCCTACCATTTTTGCCACATTAA

Upstream 100 bases:

>100_bases
GTTGTGCGCTGACACTAACGCCCGCACATTGCTGCGGGCTTTTTGATTCATTTCGCAAATGTGCTGACATTTTCCCCTCT
AATCATTACAATTTAAATTT

Downstream 100 bases:

>100_bases
AAGCAGTCGAAATTATTCTGTCTATATACTATTAATAGCTCCAGGGTCTATTGCTGTCCTCATCACGCATCGCTTTCATA
AGGCATTACTTATCGCCGTA

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNYALIIAIIISFPCALLSVFLVLKGWALIGDAMNHAMFPGIVLAWIIGMPLGIGAFIVGLSCAIATGYLKDNSIIKKDT
IIGIVFSGIFVLTINRHKSADYRYHYYITVYSAWYRLPFLPH

Sequences:

>Translated_122_residues
MNYALIIAIIISFPCALLSVFLVLKGWALIGDAMNHAMFPGIVLAWIIGMPLGIGAFIVGLSCAIATGYLKDNSIIKKDT
IIGIVFSGIFVLTINRHKSADYRYHYYITVYSAWYRLPFLPH
>Mature_122_residues
MNYALIIAIIISFPCALLSVFLVLKGWALIGDAMNHAMFPGIVLAWIIGMPLGIGAFIVGLSCAIATGYLKDNSIIKKDT
IIGIVFSGIFVLTINRHKSADYRYHYYITVYSAWYRLPFLPH

Specific function: Part of an ATP-driven transport system yfeABCD for chelated iron [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 13570; Mature: 13570

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYALIIAIIISFPCALLSVFLVLKGWALIGDAMNHAMFPGIVLAWIIGMPLGIGAFIVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LSCAIATGYLKDNSIIKKDTIIGIVFSGIFVLTINRHKSADYRYHYYITVYSAWYRLPFL
HHHHHHHCCCCCCCEECHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEEEHHHHCCCC
PH
CC
>Mature Secondary Structure
MNYALIIAIIISFPCALLSVFLVLKGWALIGDAMNHAMFPGIVLAWIIGMPLGIGAFIVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LSCAIATGYLKDNSIIKKDTIIGIVFSGIFVLTINRHKSADYRYHYYITVYSAWYRLPFL
HHHHHHHCCCCCCCEECHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEEEHHHHCCCC
PH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9495751; 11586360; 12142430 [H]