| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is ycjU [H]
Identifier: 218689307
GI number: 218689307
Start: 1498852
End: 1499511
Strand: Direct
Name: ycjU [H]
Synonym: ECED1_1525
Alternate gene names: 218689307
Gene position: 1498852-1499511 (Clockwise)
Preceding gene: 218689306
Following gene: 218689308
Centisome position: 28.77
GC content: 55.15
Gene sequence:
>660_bases ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGAGTAATCACAGATAGCGCACATCTGCATTTCCAGGCGTGGCAGCA GATTGCCGCTGAAATTGGCATCAGCATTGATGCGCAGTTTAACGAATTCCTAAAAGGGATCAGCCGCGATGAGTCCCTGC GGCGAATTCTGCAGCACGGGGGTAAAGAGGGCGATTTTAACCCACAGGAACGGGCGCAACTGGCGTATCGCAAAAATCTG CTTTACGTCCACTCACTGCGCGAACTGACGGTTAATGCTGTGCTGCCTGGCATTCACAATTTGCTGGTAGATCTCCGAGC ACAGCAGATTCCGGTTGGGCTGGCTTCTGTCTCCCTGAATGCGCCGACGATTTTAGCAGCGCTGGAGCTGCGTGAGTTTT TCACCTTCTGCGCGGACGCTTCCCAACTTAAAAACTCGAAACCGGACCCGGAAATCTTTCTCGCCGCCTGTGCCGGACTG GGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTC GGTGGGGATCGGCGCAGGCTTAACCGGGGCGCAATTATTGTTGCCCTCAACGGAATCACTCACCTGGCCGCGGTTATCGG CCTTCTGGCAAAACGTATAG
Upstream 100 bases:
>100_bases TGAACGGTCAGCTTATTTACGTCGCTGAAGAATCTGTTTTCTGTTTGGGGGATTTTATTTTGCCCTTCAATGGGACCGCT ACCACGCATCAGGAGGGTGA
Downstream 100 bases:
>100_bases CAAAGGAATCAACATGGCTCAGCTTTCGTTACAACATATTCAAAAGATCTACGATAACCAGGTGCATGTGGTGAAGGACT TCAACCTGGAAATTGCCGAT
Product: putative glucose-1-phosphate phosphodismutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKLQGVIFDLDGVITDSAHLHFQAWQQIAAEIGISIDAQFNEFLKGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNL LYVHSLRELTVNAVLPGIHNLLVDLRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
Sequences:
>Translated_219_residues MKLQGVIFDLDGVITDSAHLHFQAWQQIAAEIGISIDAQFNEFLKGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNL LYVHSLRELTVNAVLPGIHNLLVDLRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV >Mature_219_residues MKLQGVIFDLDGVITDSAHLHFQAWQQIAAEIGISIDAQFNEFLKGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNL LYVHSLRELTVNAVLPGIHNLLVDLRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=199, Percent_Identity=28.1407035175879, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1787576, Length=219, Percent_Identity=96.8036529680365, Blast_Score=430, Evalue=1e-122, Organism=Escherichia coli, GI1789046, Length=189, Percent_Identity=29.6296296296296, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1788021, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789787, Length=212, Percent_Identity=25.9433962264151, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI17137324, Length=197, Percent_Identity=27.9187817258883, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 23667; Mature: 23667
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQGVIFDLDGVITDSAHLHFQAWQQIAAEIGISIDAQFNEFLKGISRDESLRRILQHG CCCCEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHCC GKEGDFNPQERAQLAYRKNLLYVHSLRELTVNAVLPGIHNLLVDLRAQQIPVGLASVSLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH NASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MKLQGVIFDLDGVITDSAHLHFQAWQQIAAEIGISIDAQFNEFLKGISRDESLRRILQHG CCCCEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHCC GKEGDFNPQERAQLAYRKNLLYVHSLRELTVNAVLPGIHNLLVDLRAQQIPVGLASVSLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH NASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]