| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is ycjT [H]
Identifier: 218689306
GI number: 218689306
Start: 1496588
End: 1498855
Strand: Direct
Name: ycjT [H]
Synonym: ECED1_1524
Alternate gene names: 218689306
Gene position: 1496588-1498855 (Clockwise)
Preceding gene: 218689305
Following gene: 218689307
Centisome position: 28.73
GC content: 53.75
Gene sequence:
>2268_bases ATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACACTGAACAAATATGCTTCACTGATGGCGCAGGG GAACGGCTATCTTGGGCTTCGCGCCAGCCATGAAGAAGATTACACGCGCCAGACGCGCGGCATGTATCTGACGGGGCTGT ATCATCGGGCGGGTAAGGGTGAAATCAACGAACTGGTGAACCTGCCTGATGTCGTGGGGATGGAGATTGCCATAAATGGT GAGATTATCTCGTTATCCCGCGAAGCATGGCAGCGTGAGCTTAACTTTGCCAGTGGCGAATTACGTCGCAACGTTGTCTG GCGTACCAGCAACGGCACTGGTTACACCATCGCCAGCCGTCGCTTTGTTTCGGCAGACCAACTGCCGCTGATCGCGCTGG AAATCAGTATTACCCCGCTGGACGCCAACGCGTCAGTGCTGATTTCAACAGGCATTGACGCCACGCAAACCAATCACGGT CGCCAGCATCTCGACGAAACCCAGGTGCGGGTGTTTGGTCAGCATCTGATGCAGGGGATCTACACCACCCAGGATGGGCG CAGTGATGTGGCCATCAGCTGTTGCTGTAAGGTGAGCGGTGATGTGCAGCAATGCTATACCGCCAAAGAGCGCCGTTTAC TGCAACATACCTGCGCGCAGCTTCACGCAGGTGAGACGTTGACGCTGCAAAAACTGGTGTGGATCGACTGGCGGGACGAC AGACAAGCCGCTTTAGACGAATGGGGCAGTGCGTCGCTTCGTCAGCTTGAAATGTGCGCGCAGCAGAGTTACGACCAACT TCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAACGGCGGCGATGCGCACGATC AGCAAGCGTTAGATTATGCGCTTTATCACCTGCGCATCATGACGCCTGCCCACGATGAGCGCAGCAGCATTGCGGCGAAA GGTTTAACCAGCGAAGGCTACAAAGGCCACGTTTTCTGGGATACAGAAGTATTTTTGCTACCGTTCCATCTGTTTAGCGA TCCGACGGTTGCCCGAAGTTTACTGCGTTATCGCTGGCACAACTTGCCTGGCGCGCAGGAGAAAGCGCGACGCAACGGCT GGCAGGGCGCTCTGTTTCCGTGGGAAAGCGCGCGTAGCGGCGAAGAAGAGACGCCGGAATTTGCTGCCATTAACATTCGT ACCGGGTTGCGGCAAAAAGTGGCCTCTGCGCAGGCGGAACATCATCTGGTGGCCGATATCGCCTGGGCGGTTATTCAATA CTGGCGGACCACGGGGGATGAAAGTTTCATTGCTCATGAAGGCATGGCGCTACTTCTGGAGACGGCAAAGTTCTGGATTA GCCGCGCGGTGAGGGTTAACGACCGTCTGGAAATTCATGATGTTATTGGGCCAGATGAATATACCGAACATGTCAATAAT AACGCCTTCACCAGCTATATGGCGTATTACAACGTCCAGCAGGCGCTGAATATCGCTCGTCAGTTTGGCTGTAGCGACGA CGCGTTTATTCATCGTGCAGAAATGTACCTCAAAGAACTGCTGCTGCCAGAAATTCAGCCCGACGGCGTTTTGCCGCAGG ATGATTCGTTTATGGCTAAGCCGGTGATTAATCTGGCGAAATACAAAGCGGCGGCGGGGAAGCAAACCATTCTGCTGGAT TATTCACGCGCAGAAGTGAACGAGATGCAGATCCTCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCA GTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAA TCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGCGAGGGGACTGAAATCGATCTT GGTGCTGATCCACATAGCTGTGATGACGGTATCCACGCTGCCGCAACTGGCGCTATCTGGCTGGGGGCGATTCAGGGTTT TGCCGGGGTGAGCGTGCGTGACGGTGAATTACATCTCAATCCGGCGTTACCTGAGCAGTGGCAACAGTTGTCTTTCCCTC TGTTCTGGCAGGGCTGCGAATTACAGGTCACTCTCGACGCGCAGCGTATTGCGATTCGAACTTCTGCGCCCGTTTCACTG CGCTTGAACGGTCAGCTTATTTACGTCGCTGAAGAATCTGTTTTCTGTTTGGGGGATTTTATTTTGCCCTTCAATGGGAC CGCTACCACGCATCAGGAGGGTGAATGA
Upstream 100 bases:
>100_bases GCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAA ACAGGGACGCGTGTGGAATT
Downstream 100 bases:
>100_bases AACTGCAAGGGGTAATTTTCGATCTGGATGGAGTAATCACAGATAGCGCACATCTGCATTTCCAGGCGTGGCAGCAGATT GCCGCTGAAATTGGCATCAG
Product: putative glycosyl hydrolase/phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLTGLYHRAGKGEINELVNLPDVVGMEIAING EIISLSREAWQRELNFASGELRRNVVWRTSNGTGYTIASRRFVSADQLPLIALEISITPLDANASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTCAQLHAGETLTLQKLVWIDWRDD RQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTSEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVIQYWRTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMYLKELLLPEIQPDGVLPQDDSFMAKPVINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLIYVAEESVFCLGDFILPFNGTATTHQEGE
Sequences:
>Translated_755_residues MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLTGLYHRAGKGEINELVNLPDVVGMEIAING EIISLSREAWQRELNFASGELRRNVVWRTSNGTGYTIASRRFVSADQLPLIALEISITPLDANASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTCAQLHAGETLTLQKLVWIDWRDD RQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTSEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVIQYWRTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMYLKELLLPEIQPDGVLPQDDSFMAKPVINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLIYVAEESVFCLGDFILPFNGTATTHQEGE >Mature_754_residues TRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLTGLYHRAGKGEINELVNLPDVVGMEIAINGE IISLSREAWQRELNFASGELRRNVVWRTSNGTGYTIASRRFVSADQLPLIALEISITPLDANASVLISTGIDATQTNHGR QHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTCAQLHAGETLTLQKLVWIDWRDDR QAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAKG LTSEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRT GLRQKVASAQAEHHLVADIAWAVIQYWRTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNN AFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMYLKELLLPEIQPDGVLPQDDSFMAKPVINLAKYKAAAGKQTILLDY SRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLG ADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLR LNGQLIYVAEESVFCLGDFILPFNGTATTHQEGE
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=354, Percent_Identity=28.8135593220339, Blast_Score=107, Evalue=3e-23, Organism=Escherichia coli, GI1787575, Length=755, Percent_Identity=96.953642384106, Blast_Score=1528, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325283, Length=399, Percent_Identity=23.3082706766917, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24583760, Length=392, Percent_Identity=26.2755102040816, Blast_Score=107, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 84885; Mature: 84753
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLTGLYHRAGKG CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCEEEEEEECCCCCC EINELVNLPDVVGMEIAINGEIISLSREAWQRELNFASGELRRNVVWRTSNGTGYTIASR CHHHHCCCCCCCCEEEEECCEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECC RFVSADQLPLIALEISITPLDANASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI EEECCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTCAQLHAGETLTLQKLVWIDWRDD EECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCC RQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTSEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWH HHEEEEECCCCCCHHHHHHCCCCCCCCEEEEEECCEEEEEEEHHCCCCHHHHHHHHHHHC NLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVIQYWRTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHCCC NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMYLKELLLPEIQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH PVINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFY HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCEEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLIYVAEESVFCLGDFILPFNGTATTHQEGE EECCEEEEEECCCEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLTGLYHRAGKG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCEEEEEEECCCCCC EINELVNLPDVVGMEIAINGEIISLSREAWQRELNFASGELRRNVVWRTSNGTGYTIASR CHHHHCCCCCCCCEEEEECCEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECC RFVSADQLPLIALEISITPLDANASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI EEECCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTCAQLHAGETLTLQKLVWIDWRDD EECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCC RQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTSEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWH HHEEEEECCCCCCHHHHHHCCCCCCCCEEEEEECCEEEEEEEHHCCCCHHHHHHHHHHHC NLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVIQYWRTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHCCC NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMYLKELLLPEIQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH PVINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFY HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCEEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLIYVAEESVFCLGDFILPFNGTATTHQEGE EECCEEEEEECCCEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]