| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689144
Identifier: 218689144
GI number: 218689144
Start: 1330050
End: 1331114
Strand: Reverse
Name: 218689144
Synonym: ECED1_1343
Alternate gene names: NA
Gene position: 1331114-1330050 (Counterclockwise)
Preceding gene: 218689145
Following gene: 218689143
Centisome position: 25.55
GC content: 52.68
Gene sequence:
>1065_bases ATGTGTAAGTATATAGCGGTTTTAATTATCAGGATATTACTTATGTCACTAACCAGACGGAGGTTTACACAGATTCTTGC GTCGACATTGTTCCTGCATCATCTGCCGTCCTTTGCACAATCAGTCAAATTCTGGGCCTCACGGACGCTTCCCGAAGCCC AAAACATTACACGCATCGTCAGCGCAGGCGCGCCCGCCGATTTACTATTGCTGGCTGTCGCGCCAGAAAAAATGGTCGGT TTTTCCTCTTTTGATTTTGCCCGTCAGGCATTAATTCCATTGCCAGAGCACATTCGCCAGTTCCCCAGGCTGGGACGACT CGCCGGGCGCGCCAGCACACTCTCGCTGGAAGGGCTTATGGCGTTACATCCCGATTTGGTCGTTGATTGCGGCAATACGG ATGAAACCTGGATCTCCCAGGCACGGCAGGTTAGCGAACAGACACAAATACCCTGGTTATTGCTTAACGGGAAACTGGAA CAATCAGCAGAACAGTTAACAACGCTTGGCAAAACGTTAGGCGAAGAGCACCGCGCCGCAGAACAAGCCAATCTCGCCAG CCGCTTCGTTGGTGAAGCTCAGGCATTCGCCACCTCACCCGCCGCTAACCTCAGCTTTTATGCTGCGCGCGGTCCTCGAG GGCTGGAAACGGGCTTACAGGGTTCGTTGCATACCGAGGCGGCGGAATTATTAGGTTTGCATAACGTCGCGCAAATAGCC GATCGCCACGGTCTGACACAGGTTTCCATGGAAAATCTCCTGCGCTGGCAGCCGGATATTATTCTGGTTCAGGAGGCCGT TACTGCAGATTTTATTCGTCGTGATCCTCTCTGGCAGGGCGTGAAAGCGGTTGCGGAACAACGCATCTTATTTTTAAGTG GCCTGCCCTTTGGCTGGCTGGATGCCCCGCCGGGAATCAACCGTCTTCTGGGATTACGCAGACTTCACGCCTGGCTGGAT CCCGCCATCAATCGCCAGTTTAAAAGTGACATACAGCATTACGCCCAACTGTTCTGGCATTGTTCACTCAGTGACGCCGA CTATCAAAAATTGGTGGCGAGCTAA
Upstream 100 bases:
>100_bases CTGACAATTTTCTTGTGGAACAAAGTGTTATTTAAGCAACAAGCAAATCATTCTGTCTCTTTAGACAAATTTTGACATCA AACATGATCTTTTTCGCTAT
Downstream 100 bases:
>100_bases TGAGAACCGTAAACGGATGTATTTTGCTGCTGGCAGCTATCAGTATCACTTTTGCCGCCGTAAGTGGGGCTTATCATCTC GATATGCAGCAACTGCTGGC
Product: putative ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MCKYIAVLIIRILLMSLTRRRFTQILASTLFLHHLPSFAQSVKFWASRTLPEAQNITRIVSAGAPADLLLLAVAPEKMVG FSSFDFARQALIPLPEHIRQFPRLGRLAGRASTLSLEGLMALHPDLVVDCGNTDETWISQARQVSEQTQIPWLLLNGKLE QSAEQLTTLGKTLGEEHRAAEQANLASRFVGEAQAFATSPAANLSFYAARGPRGLETGLQGSLHTEAAELLGLHNVAQIA DRHGLTQVSMENLLRWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRILFLSGLPFGWLDAPPGINRLLGLRRLHAWLD PAINRQFKSDIQHYAQLFWHCSLSDADYQKLVAS
Sequences:
>Translated_354_residues MCKYIAVLIIRILLMSLTRRRFTQILASTLFLHHLPSFAQSVKFWASRTLPEAQNITRIVSAGAPADLLLLAVAPEKMVG FSSFDFARQALIPLPEHIRQFPRLGRLAGRASTLSLEGLMALHPDLVVDCGNTDETWISQARQVSEQTQIPWLLLNGKLE QSAEQLTTLGKTLGEEHRAAEQANLASRFVGEAQAFATSPAANLSFYAARGPRGLETGLQGSLHTEAAELLGLHNVAQIA DRHGLTQVSMENLLRWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRILFLSGLPFGWLDAPPGINRLLGLRRLHAWLD PAINRQFKSDIQHYAQLFWHCSLSDADYQKLVAS >Mature_354_residues MCKYIAVLIIRILLMSLTRRRFTQILASTLFLHHLPSFAQSVKFWASRTLPEAQNITRIVSAGAPADLLLLAVAPEKMVG FSSFDFARQALIPLPEHIRQFPRLGRLAGRASTLSLEGLMALHPDLVVDCGNTDETWISQARQVSEQTQIPWLLLNGKLE QSAEQLTTLGKTLGEEHRAAEQANLASRFVGEAQAFATSPAANLSFYAARGPRGLETGLQGSLHTEAAELLGLHNVAQIA DRHGLTQVSMENLLRWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRILFLSGLPFGWLDAPPGINRLLGLRRLHAWLD PAINRQFKSDIQHYAQLFWHCSLSDADYQKLVAS
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39360; Mature: 39360
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKYIAVLIIRILLMSLTRRRFTQILASTLFLHHLPSFAQSVKFWASRTLPEAQNITRIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SAGAPADLLLLAVAPEKMVGFSSFDFARQALIPLPEHIRQFPRLGRLAGRASTLSLEGLM HCCCCHHEEEEEECHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH ALHPDLVVDCGNTDETWISQARQVSEQTQIPWLLLNGKLEQSAEQLTTLGKTLGEEHRAA HHCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH EQANLASRFVGEAQAFATSPAANLSFYAARGPRGLETGLQGSLHTEAAELLGLHNVAQIA HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH DRHGLTQVSMENLLRWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRILFLSGLPFGWL HHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCC DAPPGINRLLGLRRLHAWLDPAINRQFKSDIQHYAQLFWHCSLSDADYQKLVAS CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MCKYIAVLIIRILLMSLTRRRFTQILASTLFLHHLPSFAQSVKFWASRTLPEAQNITRIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SAGAPADLLLLAVAPEKMVGFSSFDFARQALIPLPEHIRQFPRLGRLAGRASTLSLEGLM HCCCCHHEEEEEECHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH ALHPDLVVDCGNTDETWISQARQVSEQTQIPWLLLNGKLEQSAEQLTTLGKTLGEEHRAA HHCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH EQANLASRFVGEAQAFATSPAANLSFYAARGPRGLETGLQGSLHTEAAELLGLHNVAQIA HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH DRHGLTQVSMENLLRWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRILFLSGLPFGWL HHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCC DAPPGINRLLGLRRLHAWLDPAINRQFKSDIQHYAQLFWHCSLSDADYQKLVAS CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA