Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is phoR [H]
Identifier: 218688262
GI number: 218688262
Start: 438875
End: 440170
Strand: Direct
Name: phoR [H]
Synonym: ECED1_0422
Alternate gene names: 218688262
Gene position: 438875-440170 (Clockwise)
Preceding gene: 218688261
Following gene: 218688264
Centisome position: 8.42
GC content: 53.16
Gene sequence:
>1296_bases GTGCTGGAACGGCTGTCGTGGAAAAGGCTGGTGCTGGAGCTGCTACTTTGCTGCCTCCCGGCTTTCATCCTGGGTGCATT TTTTGGTTACCTGCCCTGGTTTTTGCTGGCATCGGTAACAGGACTGCTTATCTGGCATTTCTGGAATTTATTGCGCCTTT CATGGTGGCTGTGGGTGGATCGTAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACAC CAGATGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCT GCCCGACGCGGTGGTGCTGACCACGGAAGAGGGCGGTATTTTCTGGTGCAACGGTCTGGCGCAACAGATTCTTGGCTTGC GCTGGCCGGAAGATAACGGGCAGAACATCCTTAACTTGCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGAT TTCTCTCGCCCGCTCAATCTGGTGCTCAATACCGGGCGGCATCTGGAGATTCGCGTCATGCCTTATACCCACAAACAGTT GCTGATGGTGGCGCGAGATGTCACGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATG AGTTACGTACGCCATTGACCGTGTTACAGGGTTACCTGGAGATGATGGATGAGCAACCGCTGGAAGGCGCGGTACGTGAA AAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGGTTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGA AGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTCGTTGAGCGCGAGGCTCAGACTC TGAGTCAGAAAAAACAGACATTTACCTTTGAGATAGATAACGGCCTCAAGGTGTCAGGCAACGAAGATCAGCTACGCAGT GCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCC GCACGGTGCCGAATTTAGTGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCGTTTTT ATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGTGGTAGCGGATTAGGGTTAGCGATCGTGAAACATGCGGTGAATCAT CACGAAAGTCGCCTGAATATTGAGAGTACAGTAGGAAAAGGTACACGTTTCAGTTTTGTTATCCCGGAACGTTTAATTGC CAAAAACAGCGATTAA
Upstream 100 bases:
>100_bases GACCGTGCGCGGTACAGGGTATCGTTTTTCAACCCGCTTTTAAGGCCTTGCTCATCGGACGTAGAGCAGGGCTTATGATT TCTTAACTGGAGTATCTTAC
Downstream 100 bases:
>100_bases TTCGCCTTTGTCATCTTTTATTGCCATAAGCCAGTCGATGCTGGCTTATTTTCTTTGCAGTCGAAATACGGGCGTTAGAT TTTACAACGGTTGGTGATTT
Product: phosphate regulon sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLH QMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRS AISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNH HESRLNIESTVGKGTRFSFVIPERLIAKNSD
Sequences:
>Translated_431_residues MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLH QMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRS AISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNH HESRLNIESTVGKGTRFSFVIPERLIAKNSD >Mature_431_residues MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLH QMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRS AISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNH HESRLNIESTVGKGTRFSFVIPERLIAKNSD
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=431, Percent_Identity=99.7679814385151, Blast_Score=882, Evalue=0.0, Organism=Escherichia coli, GI1786783, Length=263, Percent_Identity=33.4600760456274, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788393, Length=253, Percent_Identity=27.6679841897233, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1790346, Length=231, Percent_Identity=30.3030303030303, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1787894, Length=229, Percent_Identity=31.4410480349345, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788713, Length=229, Percent_Identity=28.3842794759825, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789403, Length=257, Percent_Identity=30.3501945525292, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI48994928, Length=276, Percent_Identity=28.6231884057971, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=26.0089686098655, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=27.1929824561404, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788549, Length=348, Percent_Identity=23.5632183908046, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1789149, Length=243, Percent_Identity=29.6296296296296, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789808, Length=214, Percent_Identity=31.3084112149533, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1790861, Length=201, Percent_Identity=30.3482587064677, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790551, Length=199, Percent_Identity=31.1557788944724, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI87081816, Length=261, Percent_Identity=26.4367816091954, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790300, Length=351, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=25.974025974026, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786912, Length=336, Percent_Identity=24.1071428571429, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1790567, Length=352, Percent_Identity=24.4318181818182, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49631; Mature: 49631
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCE FWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVM EEEHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEEE PYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHH KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHE FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPG EEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCCCCC IAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFV CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEE IPERLIAKNSD CCHHHHCCCCC >Mature Secondary Structure MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCE FWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVM EEEHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEEE PYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHH KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHE FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPG EEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCCCCC IAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFV CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEE IPERLIAKNSD CCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3550103; 9278503; 2187152; 8391104 [H]