Click here to switch to the map view.

The map label for this gene is ygaV [C]

Identifier: 218550789

GI number: 218550789

Start: 3576074

End: 3576394

Strand: Reverse

Name: ygaV [C]

Synonym: EFER_3500

Alternate gene names: 218550789

Gene position: 3576394-3576074 (Counterclockwise)

Preceding gene: 218550792

Following gene: 218550780

Centisome position: 77.94

GC content: 47.66

Gene sequence:

>321_bases
ATGCAATTGGAAGAGGTCGCTAAGGCACTGAAAGAGTTAGGTCATCCGACCCGTTTGTTCATATTTAAGCATCTGGTCAA
AGCGGGGGAACAAGGTTTGCCGGTCGGTGAGTTGCAAAAGCAGCTTGGGATACCCGGCTCTACACTCAGTCACCATATTT
CAGCACTGGTATCGGTAGGGTTGGTCAAACAAAACCGTGAGAGTCGGACGCTGATGTGTGTTTCGCAATACGCAATGCTG
GAAGCGATAATTGAATTTTTACGTGAGGAGTGCTGCGTAAACAGCAAAACAGATGGCGAAGGAGCCACGAAGAACAAATA
A

Upstream 100 bases:

>100_bases
CTCATTGAATAAAACTATATTTCCAGAATAATCGAAATGAGATTCAGATCAAGATATTTCTGGTATTATCGAAATATCAA
CCAGACAGAGGGGGTGACAC

Downstream 100 bases:

>100_bases
GGGGGCATATCCCCCTTTAGTTATTTCAGGCGTTTACCCGCTTCATCAACCACTTTCTCGCCATCTTCCTTGGTGAACGC
GCCTTGTTGCGCATCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Regulatory Protein Arsr; ArsR Family Regulatory Protein; Transcriptional Regulator ArsR Domain; Transcription Regulator ArsR; Transcription Regulator Protein; Transcriptional Regulator ArsR; Arsenical Resistance Transcriptional Regulator; Arsenical Resistance Transcriptional Regulator Arsr

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAML
EAIIEFLREECCVNSKTDGEGATKNK

Sequences:

>Translated_106_residues
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAML
EAIIEFLREECCVNSKTDGEGATKNK
>Mature_106_residues
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAML
EAIIEFLREECCVNSKTDGEGATKNK

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11660; Mature: 11660

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVG
CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
LVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKTDGEGATKNK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVG
CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
LVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKTDGEGATKNK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA