Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is damX [H]
Identifier: 218550644
GI number: 218550644
Start: 3410365
End: 3411645
Strand: Reverse
Name: damX [H]
Synonym: EFER_3354
Alternate gene names: 218550644
Gene position: 3411645-3410365 (Counterclockwise)
Preceding gene: 218550645
Following gene: 218550643
Centisome position: 74.35
GC content: 51.91
Gene sequence:
>1281_bases ATGGATGAATTCAAACCAGAAGACGAGCTGAAACCCGATCCCAGCGATCGTCGTACTGGTCGTTCTCGTCAATCTTCCGA ACGTTCTGAACGTGGTGAGCCACAGATCAATTTTGATGATATTGATTTGGATGCTGAAGACACCCGCCCAACTCGTGCGC AAAAAGAGCGTAACGAGGCGCCGGAAGTCGAAGAAGATTACGAATCTGAAGATGAAGCCGTGGATGAAGAACGCGTAGAG CGTCGTCCGCGTAAGCGTAAGAAGCCCGCAGCTAAACCTGCATCCCGTCAATATATGATGATGGGGGTTGGTGTGCTGGT GTTGCTGCTGCTCATCATCGGTATTGGTTCGGCACTAAAAGCACCTTCAACTTCATCAACCAGTGAGCAAACAGCCTCAG GCGAGAAGAGTATTAATCTTTCTGGTGATGCAGCCGATCAGGCAAATGGGGCGCAACCTGCTCCGGGAACGACTTCTGCT GAACAAACCGCAGGTAATGCACCTCAGGATGTTACTCTGCCACCTATCTCATCTACGCCTACTCAGGGGCAAACTTCAGT AGCAACTGAAGGACAGCAGCGCGTTGAAGTTCAGGGCGATTTGAACAATGCTCTTACTCAACCGCAGAATCAGCAGCAGA TGAATGATGTGGCAGTAAATTCAACACTGCCAACTGAACCAGCAACGGTTGCTCCGGTGCGTAATGGTGCGGCACCAGCA CAAACAGCGGCTACGCAAACTACCACGCGCCCAGAACGTAAACAGGCCGTGATTGAGCCGAAAAAACCGCAAGCAACGGC GAAAACAGAGTCGAAACCAGTAACGCAACCGAAACGTCCTGAACCGACAGCACCGGTAGCGACGACCAGGGCACCTGCAA CGACATCTACGCCAGTAACTGCCCCAGCGCCGAAAGCGACGGCCAGTGCCGAACCTGTGCAAACGGCATCGCCAGCGCAA TCAACTGCAACGGCATCTACTGGTGGTAAGAGCACGGGTAACGTAGGTTCGCTGAAATCGGCACCTTCCAGCCACTATAC GTTACAGCTCAGCAGTTCTTCGAACTACGACAACCTGAACGGTTGGGCGAAGAAAGAGAACCTGAAAAATTATGTTGTCT ATGAGACAACACGTAACGGTCAACCGTGGTATGTACTGGTTTCTGGCGTTTACTCTTCGAAAGAAGAAGCGAAAAAAGCC GTGTCTACGTTGCCAGCCGATGTGCAGGCGAAAAATCCGTGGGCAAAACCACTGCATCAGGTGCAGGCCGATCTGAAGTG A
Upstream 100 bases:
>100_bases CAGGCGTAAAAACAAGAAAGGTCAGACCGCCGTATCCGGGGGTCTTTTTGCTTCGGGATTAATGCACGTAGTGAGCATTA ACCTTTTAGTGGGGTGTTAA
Downstream 100 bases:
>100_bases TCCAGGCTATGCCCTGCAATTTTTTGATGTTTCGCCCGATTGCGGGGCAAGACTACAGCGCAGGATGCTGTCGGAGCTTT CTCCACAGCCGGAGAAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MDEFKPEDELKPDPSDRRTGRSRQSSERSERGEPQINFDDIDLDAEDTRPTRAQKERNEAPEVEEDYESEDEAVDEERVE RRPRKRKKPAAKPASRQYMMMGVGVLVLLLLIIGIGSALKAPSTSSTSEQTASGEKSINLSGDAADQANGAQPAPGTTSA EQTAGNAPQDVTLPPISSTPTQGQTSVATEGQQRVEVQGDLNNALTQPQNQQQMNDVAVNSTLPTEPATVAPVRNGAAPA QTAATQTTTRPERKQAVIEPKKPQATAKTESKPVTQPKRPEPTAPVATTRAPATTSTPVTAPAPKATASAEPVQTASPAQ STATASTGGKSTGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYSSKEEAKKA VSTLPADVQAKNPWAKPLHQVQADLK
Sequences:
>Translated_426_residues MDEFKPEDELKPDPSDRRTGRSRQSSERSERGEPQINFDDIDLDAEDTRPTRAQKERNEAPEVEEDYESEDEAVDEERVE RRPRKRKKPAAKPASRQYMMMGVGVLVLLLLIIGIGSALKAPSTSSTSEQTASGEKSINLSGDAADQANGAQPAPGTTSA EQTAGNAPQDVTLPPISSTPTQGQTSVATEGQQRVEVQGDLNNALTQPQNQQQMNDVAVNSTLPTEPATVAPVRNGAAPA QTAATQTTTRPERKQAVIEPKKPQATAKTESKPVTQPKRPEPTAPVATTRAPATTSTPVTAPAPKATASAEPVQTASPAQ STATASTGGKSTGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYSSKEEAKKA VSTLPADVQAKNPWAKPLHQVQADLK >Mature_426_residues MDEFKPEDELKPDPSDRRTGRSRQSSERSERGEPQINFDDIDLDAEDTRPTRAQKERNEAPEVEEDYESEDEAVDEERVE RRPRKRKKPAAKPASRQYMMMGVGVLVLLLLIIGIGSALKAPSTSSTSEQTASGEKSINLSGDAADQANGAQPAPGTTSA EQTAGNAPQDVTLPPISSTPTQGQTSVATEGQQRVEVQGDLNNALTQPQNQQQMNDVAVNSTLPTEPATVAPVRNGAAPA QTAATQTTTRPERKQAVIEPKKPQATAKTESKPVTQPKRPEPTAPVATTRAPATTSTPVTAPAPKATASAEPVQTASPAQ STATASTGGKSTGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYSSKEEAKKA VSTLPADVQAKNPWAKPLHQVQADLK
Specific function: Directly or indirectly interferes with cell division [H]
COG id: COG3266
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789790, Length=437, Percent_Identity=81.9221967963387, Blast_Score=585, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007730 [H]
Pfam domain/function: PF05036 SPOR [H]
EC number: NA
Molecular weight: Translated: 45456; Mature: 45456
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEFKPEDELKPDPSDRRTGRSRQSSERSERGEPQINFDDIDLDAEDTRPTRAQKERNEA CCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC PEVEEDYESEDEAVDEERVERRPRKRKKPAAKPASRQYMMMGVGVLVLLLLIIGIGSALK CCHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHC APSTSSTSEQTASGEKSINLSGDAADQANGAQPAPGTTSAEQTAGNAPQDVTLPPISSTP CCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC TQGQTSVATEGQQRVEVQGDLNNALTQPQNQQQMNDVAVNSTLPTEPATVAPVRNGAAPA CCCCCHHHCCCCCEEEECCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCH QTAATQTTTRPERKQAVIEPKKPQATAKTESKPVTQPKRPEPTAPVATTRAPATTSTPVT HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPKATASAEPVQTASPAQSTATASTGGKSTGNVGSLKSAPSSHYTLQLSSSSNYDNLN CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC GWAKKENLKNYVVYETTRNGQPWYVLVSGVYSSKEEAKKAVSTLPADVQAKNPWAKPLHQ CHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH VQADLK HHHCCC >Mature Secondary Structure MDEFKPEDELKPDPSDRRTGRSRQSSERSERGEPQINFDDIDLDAEDTRPTRAQKERNEA CCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC PEVEEDYESEDEAVDEERVERRPRKRKKPAAKPASRQYMMMGVGVLVLLLLIIGIGSALK CCHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHC APSTSSTSEQTASGEKSINLSGDAADQANGAQPAPGTTSAEQTAGNAPQDVTLPPISSTP CCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC TQGQTSVATEGQQRVEVQGDLNNALTQPQNQQQMNDVAVNSTLPTEPATVAPVRNGAAPA CCCCCHHHCCCCCEEEECCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCH QTAATQTTTRPERKQAVIEPKKPQATAKTESKPVTQPKRPEPTAPVATTRAPATTSTPVT HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPKATASAEPVQTASPAQSTATASTGGKSTGNVGSLKSAPSSHYTLQLSSSSNYDNLN CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC GWAKKENLKNYVVYETTRNGQPWYVLVSGVYSSKEEAKKAVSTLPADVQAKNPWAKPLHQ CHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH VQADLK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]