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The map label for this gene is yhfW [H]

Identifier: 218550636

GI number: 218550636

Start: 3403051

End: 3404277

Strand: Reverse

Name: yhfW [H]

Synonym: EFER_3346

Alternate gene names: 218550636

Gene position: 3404277-3403051 (Counterclockwise)

Preceding gene: 218550637

Following gene: 218550635

Centisome position: 74.19

GC content: 55.18

Gene sequence:

>1227_bases
ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGGGCAATGAAAGATGTCACGTTGGTGCGTCCGCAGGA
TGCCGGGGCGAATACCTGTGGTCACATCCTGAGCCAGTTGCCGCATTTGCAGCTACCAACGCTGGAGAAAATGGGGCTAA
TCAACGCATTAGGTTATGCGCCTGGCGATATGCAGCCGTCAGACTCCGCAACCTGGGGCGTGGCAGAGTTGCAACATGAA
GGTGGCGACACCTTTATGGGGCATCAGGAAATTTTAGGCACGCGCCCGTTACCGCCGCTGCGTATGCCCTTTCACGATGC
GATTGACCGTGTTGAACAGGCATTAGTCACCGCTGGCTGGTGGGTTGAGCGCCGTGGCGAAGAGTTGCAATTTCTGTGGG
TCAATCAGGCGGTTGCGATTGGCGATAACCTCGAGGCGGATTTAGGCCAGGTCTATAACATCACCGCCAATCTCTCTGCG
ATCTCTTTTGACGACGCAATCAAAATTGGTCGTATCGTGCGTGAGCAGGTCCAGGTCGGTCGGGTCATTACATTTGGCGG
CCTGTTAACCGACAGCCAGCGCATTCTCGATGCGGCTGAAAGTAAAGAAGGGCGCTTTATTGGCATAAATGCGCCGCGTT
CTGGCGCTTATGACAATGGCTTTCAGGTCGTACATATGGGCTATGGCGTCGATGAAAAAGTGCAGGTGCCGCACCAACTG
CATCAAGTGGGCGTGCCCACGGTGCTGGTGGGTAAGGTGGCAGATATCGTCAGCAATCCTTATGGCGTGAGCTGGCAAAA
CCTGGTGGATAGCCAGCGGATTATGGATGTCACCCTCGACGAATTTAACACGCATCCGACGGCGTTTATTTGCACCAATA
TCCAGGAAACCGACCTCGCTGGTCACGCAGAAGACGTCGCACGTTATGCCGAACGTTTGCAGGTCGTTGACCGTAACCTT
GCCCGGCTTGTTGAGGCGATGCAGCCAGATGATTACCTGGTCGTGATGGCGGATCACGGTAACGATCCGACAATCGGTCA
CAGCCACCATACCCGCGAAGTGGTGCCGGTGCTGGTTTATCAGCAAGGGCTGGTCGCCACGCAGCTCGGTGTGCGCCCCA
CGCTTTCTGATGTGGGGGCTACCGTGTGTGAATTTTTCCGTGCGCCACCGCCACAAAATGGTCGCTCTTTTCTTTCCTTC
CTCCGGTTTGCAGGAGACACCCTATGA

Upstream 100 bases:

>100_bases
TTGTCACTCGTAGCGATGTGGTGCTGGTGTCCGGTATTCACCGTGGCGAACCGGAAATCGTTGGTCGTTATGACAGTCTT
GGAAGCTCTCTGGAGGCGTA

Downstream 100 bases:

>100_bases
GTTTTGATCCAACGGGCTACACCCTGGCCCATGAGCATCTGCATATTGATCTCTCCGGCTTTAAAAACAACGTGGACTGC
CGCCTTGATCAGTATGCGTT

Product: mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKMGLINALGYAPGDMQPSDSATWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFHDAIDRVEQALVTAGWWVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSA
ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPHQL
HQVGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDVTLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNL
ARLVEAMQPDDYLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRPTLSDVGATVCEFFRAPPPQNGRSFLSF
LRFAGDTL

Sequences:

>Translated_408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKMGLINALGYAPGDMQPSDSATWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFHDAIDRVEQALVTAGWWVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSA
ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPHQL
HQVGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDVTLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNL
ARLVEAMQPDDYLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRPTLSDVGATVCEFFRAPPPQNGRSFLSF
LRFAGDTL
>Mature_407_residues
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKMGLINALGYAPGDMQPSDSATWGVAELQHEG
GDTFMGHQEILGTRPLPPLRMPFHDAIDRVEQALVTAGWWVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSAI
SFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPHQLH
QVGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDVTLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLA
RLVEAMQPDDYLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRPTLSDVGATVCEFFRAPPPQNGRSFLSFL
RFAGDTL

Specific function: Unknown

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1789781, Length=408, Percent_Identity=94.6078431372549, Blast_Score=795, Evalue=0.0,
Organism=Escherichia coli, GI1790843, Length=451, Percent_Identity=28.159645232816, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: NA

Molecular weight: Translated: 44684; Mature: 44553

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKMGLINALGYA
CCEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFHDAIDRVEQALVTAGW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSAISFDDAIKIGRIVREQVQVG
HHHCCCCEEEEEEECCEEEECCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHC
RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPHQL
CEEEECCEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHH
HQVGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDVTLDEFNTHPTAFICTNIQETDLA
HHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHEEEHHHCCCCCCEEEECCCCCCCCC
GHAEDVARYAERLQVVDRNLARLVEAMQPDDYLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
QQGLVATQLGVRPTLSDVGATVCEFFRAPPPQNGRSFLSFLRFAGDTL
HCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKMGLINALGYA
CEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFHDAIDRVEQALVTAGW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WVERRGEELQFLWVNQAVAIGDNLEADLGQVYNITANLSAISFDDAIKIGRIVREQVQVG
HHHCCCCEEEEEEECCEEEECCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHC
RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPHQL
CEEEECCEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHH
HQVGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDVTLDEFNTHPTAFICTNIQETDLA
HHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHEEEHHHCCCCCCEEEECCCCCCCCC
GHAEDVARYAERLQVVDRNLARLVEAMQPDDYLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH
QQGLVATQLGVRPTLSDVGATVCEFFRAPPPQNGRSFLSFLRFAGDTL
HCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]