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The map label for this gene is rdgC [H]

Identifier: 218549946

GI number: 218549946

Start: 2703791

End: 2704702

Strand: Direct

Name: rdgC [H]

Synonym: EFER_2631

Alternate gene names: 218549946

Gene position: 2703791-2704702 (Clockwise)

Preceding gene: 218549944

Following gene: 218549952

Centisome position: 58.92

GC content: 48.03

Gene sequence:

>912_bases
ATGCTGTGGTTCAAAAATTTAATGGTATACCGTCTTAGCCGCGATGTTTCGCTGCGTGCCGAAGAGATGGAAAAGCAACT
TGCCTCAATGGCATTTACCCCCTGCGGTAGCCAGGATATGGCGAAAATGGGTTGGGTTGCACCAATGGGTTCTCACAGCG
ATGCACTCACGCACGTTGCCAATGGTCAAATTGTTATTTGCGCACGCAAAGAAGAAAAAATTCTTCCATCACCGGTCATT
AAGCAAGCGCTGGAAGCCAAAATCGCCAAACTGGAAGCAGAACAGGCGCGCAAGCTGAAGAAAACAGAAAAAGATTCGCT
TAAAGATGAAGTGCTGCACTCACTCCTGCCGCGCGCCTTCAGCCGTTTTAGCCAGACGATGATGTGGATTGATACGGTTA
ACGGTCTGATTATGGTCGACTGCGCCAGTGCGAAAAAAGCAGAAGATACACTGGCACTGCTGCGTAAAAGTCTGGGCTCT
TTACCCGTCGTGCCACTGACACTGGAGAATCCGATTGAACTGACGCTAACCGAATGGGTACGTTCGGGTAGCGCAGCACA
AGGTTTCCAGTTACTGGACGAAGCCGAACTCAAATCCTTACTGGAAGATGGCGGCGTGATCCGGGCGAAAAAACAGGATC
TCACCAGCGAAGAGATCACCAATCATATTGAAGCTGGCAAAGTGGTTACTAAGTTAGCTTTAGACTGGCAGCAACGCGTG
CAGTTTGTGATGTGTGATGATGGTTCGCTCAAACGCCTGAAATTCTGCGACGAATTACGCGATCAAAACGAAGATATTGA
TCGTGAAGATTTTGCCCAACGTTTTGATGCTGATTTCATTCTGATGACAGGTGAACTGGCTGCGTTAATTCAAAATCTGA
TTGAAGGATTAGGTGGCGAAGCACAGCGTTAA

Upstream 100 bases:

>100_bases
ATCAATAGCGTAGAGACGGGAAACGGGATTGGCAATGCAAGGGGGCCGACAATTCGTTATTATGCCCGCTAAATTTAACA
ACAAGGCCGTGGAAATTATC

Downstream 100 bases:

>100_bases
ACTGAAATACCCTCTCCTGTTACGGAGAGGGATTGCTGTTACAAATAACGGCACAAATAAGATGTCGGTTCAGCAACCTG
CAAATGGAATTCGCTATGCC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLWFKNLMVYRLSRDVSLRAEEMEKQLASMAFTPCGSQDMAKMGWVAPMGSHSDALTHVANGQIVICARKEEKILPSPVI
KQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLTLENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRV
QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR

Sequences:

>Translated_303_residues
MLWFKNLMVYRLSRDVSLRAEEMEKQLASMAFTPCGSQDMAKMGWVAPMGSHSDALTHVANGQIVICARKEEKILPSPVI
KQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLTLENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRV
QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR
>Mature_303_residues
MLWFKNLMVYRLSRDVSLRAEEMEKQLASMAFTPCGSQDMAKMGWVAPMGSHSDALTHVANGQIVICARKEEKILPSPVI
KQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLTLENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRV
QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=303, Percent_Identity=98.019801980198, Blast_Score=610, Evalue=1e-176,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33922; Mature: 33922

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWFKNLMVYRLSRDVSLRAEEMEKQLASMAFTPCGSQDMAKMGWVAPMGSHSDALTHVA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHCC
NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLTLENPIELTLTEWV
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRV
HCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCC
AQR
CCC
>Mature Secondary Structure
MLWFKNLMVYRLSRDVSLRAEEMEKQLASMAFTPCGSQDMAKMGWVAPMGSHSDALTHVA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHCC
NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLTLENPIELTLTEWV
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRV
HCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCC
AQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA