Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is pcaK [H]
Identifier: 218549912
GI number: 218549912
Start: 2667093
End: 2668568
Strand: Direct
Name: pcaK [H]
Synonym: EFER_2597
Alternate gene names: 218549912
Gene position: 2667093-2668568 (Clockwise)
Preceding gene: 218549911
Following gene: 218549913
Centisome position: 58.12
GC content: 49.46
Gene sequence:
>1476_bases TTGAAGTTCCGCTCAGCGGGAAACAGGGGGCATTACCCGCCGAAAAGCGCGCCCAATTACTGTTTAACGCAGCACAGGCT TACCTGTATCCGTCGGTATAAGGGGAAGATGATGGCACAATCAGATTTGCTCGACGTGCGAGAATTAATCAATCGCAATC CTCTTAGCCGCTACCAAAAGCTGGTGATCTTATTAGGCTTTGTTGTGATCGCACTGGATGGCTTTGATATTGCGATTATG GGATTTATCGCCCCGGTACTTAAGCAGGAATGGGGGGCATCTAATCATGAACTTGGATTTGTCATTAGCGCCGCTCTGAT TGGGCTGGCATTGGGTGCCATGTTTTCCGGACCGCTCGCCGACTGGCTGGGACGCAAAAAAATCATCATTAATAGCGTGT TCTTTTTTGGTATCTGGACCGTAGCAACCGCCTTTTCACAAAATATAGAGCAGATGATTTTCTTTCGTTTTATGACCGGA TTGGGGCTTGGCGCTGCAATGCCTAATATGAGTACGCTGGTCTCAGAATATGCCCCTGAACGTAAGCGCTCTTTTATTAT TACGATTATTTTCTGCGGTTTTACTTTTGGTGCAGCAGCTGGTGGTTTTGCCGCTTCATGGCTAATCCCACAATTTGGCT GGCATTCGCTGATGGCTCTTGGCGGTATTTTACCCGTCCTGTTTGCTCCGGTTCTGATTTGGCTCCTGCCGGAATCAGTA AGATTTCTGGTTATCAAACGCGCGCCACCTGTTCGCATTCGCATGATCTTACAGCGTCTATACCCGGGGAAAATTGCCGA TAACGTCGAGTTTATTTTGCCTACACAACCGCTGGATAAAAGTGCCATGCGGATTGTGCTTTCACCGCAATATCGCTTTG GCTCCCTGATGCTTTGGCTGGTCTATTTTATGGGACTGTTTCTGGTCTATATACTTGGTAGCTGGTTACCAACGCTGGTA AAAGAGGTGGGAATGACTGTAAGTCAGGCTGCAGTGATAACAGCCCTTTATCAGGCAGGCGGTACGATAGGTTCGCTGTT TGCCGGTTGGCTTATGGATAAGATTAATCCCCATCGGGCGCTGGGTGTTATTTACGGCGTTGGGGGGCTTATCACCATGT CGATGGGCTATTTTTCCACCAGCTTTACACTCCTTTGTCTGCTTGCCTTCATCTGCGGGGCTTGTCTGAATGGTGCCAAC ACCGGGATGAACGCAATGTCAGCACGTTTTTATCCTACACAAGCGCGGGCGACAGGCTCCAGTTGGATGCATGGTATCGG GCGAATTGGTGCCATCCTCAGCGCCTTTGCCGGGGCGGAGATGATGGCAATGGAGTTGAGTTTCGAAGCGGTGTTCCTGC TTTTGGGGATCCCGGCTGCAATTACCGTAGTGGCGATATCAGCAAAAGGTATGTTTGCTTCATCGAGTACTCACGAGTCA ACACCTGTCGCTTCAGCGCTTAGAGAACCTTCCTGA
Upstream 100 bases:
>100_bases ATTATTCGTCAGGCGCGTACAGCACGCCAGATCCCAGGTGAAGGAGGGCTGAATTTGCACGGCCTGATGGCCGCATTACC AGCCGATCTCCCGGTATCCG
Downstream 100 bases:
>100_bases AATACTCCATACAGCAAATCTTGAGCGCTAAAGTCAGATTACTGGCTTTAGCGCACAAATCATTAATCGAATTAATATTT GTTAATTATCGCTCTGTTTA
Product: 4-hydroxybenzoate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKFRSAGNRGHYPPKSAPNYCLTQHRLTCIRRYKGKMMAQSDLLDVRELINRNPLSRYQKLVILLGFVVIALDGFDIAIM GFIAPVLKQEWGASNHELGFVISAALIGLALGAMFSGPLADWLGRKKIIINSVFFFGIWTVATAFSQNIEQMIFFRFMTG LGLGAAMPNMSTLVSEYAPERKRSFIITIIFCGFTFGAAAGGFAASWLIPQFGWHSLMALGGILPVLFAPVLIWLLPESV RFLVIKRAPPVRIRMILQRLYPGKIADNVEFILPTQPLDKSAMRIVLSPQYRFGSLMLWLVYFMGLFLVYILGSWLPTLV KEVGMTVSQAAVITALYQAGGTIGSLFAGWLMDKINPHRALGVIYGVGGLITMSMGYFSTSFTLLCLLAFICGACLNGAN TGMNAMSARFYPTQARATGSSWMHGIGRIGAILSAFAGAEMMAMELSFEAVFLLLGIPAAITVVAISAKGMFASSSTHES TPVASALREPS
Sequences:
>Translated_491_residues MKFRSAGNRGHYPPKSAPNYCLTQHRLTCIRRYKGKMMAQSDLLDVRELINRNPLSRYQKLVILLGFVVIALDGFDIAIM GFIAPVLKQEWGASNHELGFVISAALIGLALGAMFSGPLADWLGRKKIIINSVFFFGIWTVATAFSQNIEQMIFFRFMTG LGLGAAMPNMSTLVSEYAPERKRSFIITIIFCGFTFGAAAGGFAASWLIPQFGWHSLMALGGILPVLFAPVLIWLLPESV RFLVIKRAPPVRIRMILQRLYPGKIADNVEFILPTQPLDKSAMRIVLSPQYRFGSLMLWLVYFMGLFLVYILGSWLPTLV KEVGMTVSQAAVITALYQAGGTIGSLFAGWLMDKINPHRALGVIYGVGGLITMSMGYFSTSFTLLCLLAFICGACLNGAN TGMNAMSARFYPTQARATGSSWMHGIGRIGAILSAFAGAEMMAMELSFEAVFLLLGIPAAITVVAISAKGMFASSSTHES TPVASALREPS >Mature_491_residues MKFRSAGNRGHYPPKSAPNYCLTQHRLTCIRRYKGKMMAQSDLLDVRELINRNPLSRYQKLVILLGFVVIALDGFDIAIM GFIAPVLKQEWGASNHELGFVISAALIGLALGAMFSGPLADWLGRKKIIINSVFFFGIWTVATAFSQNIEQMIFFRFMTG LGLGAAMPNMSTLVSEYAPERKRSFIITIIFCGFTFGAAAGGFAASWLIPQFGWHSLMALGGILPVLFAPVLIWLLPESV RFLVIKRAPPVRIRMILQRLYPGKIADNVEFILPTQPLDKSAMRIVLSPQYRFGSLMLWLVYFMGLFLVYILGSWLPTLV KEVGMTVSQAAVITALYQAGGTIGSLFAGWLMDKINPHRALGVIYGVGGLITMSMGYFSTSFTLLCLLAFICGACLNGAN TGMNAMSARFYPTQARATGSSWMHGIGRIGAILSAFAGAEMMAMELSFEAVFLLLGIPAAITVVAISAKGMFASSSTHES TPVASALREPS
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=473, Percent_Identity=23.0443974630021, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI7662270, Length=308, Percent_Identity=23.0519480519481, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI166064021, Length=361, Percent_Identity=24.6537396121884, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI154350196, Length=290, Percent_Identity=26.551724137931, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI87081723, Length=390, Percent_Identity=33.5897435897436, Blast_Score=183, Evalue=3e-47, Organism=Escherichia coli, GI87082404, Length=446, Percent_Identity=24.4394618834081, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI87082231, Length=193, Percent_Identity=28.4974093264249, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786229, Length=378, Percent_Identity=23.8095238095238, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788074, Length=403, Percent_Identity=27.7915632754342, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87082159, Length=391, Percent_Identity=22.5063938618926, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789207, Length=358, Percent_Identity=24.3016759776536, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI87082320, Length=309, Percent_Identity=20.7119741100324, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32564663, Length=456, Percent_Identity=25.219298245614, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24640198, Length=458, Percent_Identity=22.9257641921397, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24640196, Length=458, Percent_Identity=22.9257641921397, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24640200, Length=458, Percent_Identity=22.9257641921397, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI19922874, Length=447, Percent_Identity=22.1476510067114, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53530; Mature: 53530
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRSAGNRGHYPPKSAPNYCLTQHRLTCIRRYKGKMMAQSDLLDVRELINRNPLSRYQK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVILLGFVVIALDGFDIAIMGFIAPVLKQEWGASNHELGFVISAALIGLALGAMFSGPLA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH DWLGRKKIIINSVFFFGIWTVATAFSQNIEQMIFFRFMTGLGLGAAMPNMSTLVSEYAPE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCH RKRSFIITIIFCGFTFGAAAGGFAASWLIPQFGWHSLMALGGILPVLFAPVLIWLLPESV HHHHEEEEHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC RFLVIKRAPPVRIRMILQRLYPGKIADNVEFILPTQPLDKSAMRIVLSPQYRFGSLMLWL EEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHEEEEECCCHHHHHHHHHH VYFMGLFLVYILGSWLPTLVKEVGMTVSQAAVITALYQAGGTIGSLFAGWLMDKINPHRA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH LGVIYGVGGLITMSMGYFSTSFTLLCLLAFICGACLNGANTGMNAMSARFYPTQARATGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHCCCCH SWMHGIGRIGAILSAFAGAEMMAMELSFEAVFLLLGIPAAITVVAISAKGMFASSSTHES HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC TPVASALREPS CHHHHHHCCCC >Mature Secondary Structure MKFRSAGNRGHYPPKSAPNYCLTQHRLTCIRRYKGKMMAQSDLLDVRELINRNPLSRYQK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVILLGFVVIALDGFDIAIMGFIAPVLKQEWGASNHELGFVISAALIGLALGAMFSGPLA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH DWLGRKKIIINSVFFFGIWTVATAFSQNIEQMIFFRFMTGLGLGAAMPNMSTLVSEYAPE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCH RKRSFIITIIFCGFTFGAAAGGFAASWLIPQFGWHSLMALGGILPVLFAPVLIWLLPESV HHHHEEEEHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC RFLVIKRAPPVRIRMILQRLYPGKIADNVEFILPTQPLDKSAMRIVLSPQYRFGSLMLWL EEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHEEEEECCCHHHHHHHHHH VYFMGLFLVYILGSWLPTLVKEVGMTVSQAAVITALYQAGGTIGSLFAGWLMDKINPHRA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH LGVIYGVGGLITMSMGYFSTSFTLLCLLAFICGACLNGANTGMNAMSARFYPTQARATGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHCCCCH SWMHGIGRIGAILSAFAGAEMMAMELSFEAVFLLLGIPAAITVVAISAKGMFASSSTHES HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC TPVASALREPS CHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]