Click here to switch to the map view.

The map label for this gene is ibrB [H]

Identifier: 218549810

GI number: 218549810

Start: 2554056

End: 2554673

Strand: Direct

Name: ibrB [H]

Synonym: EFER_2492

Alternate gene names: 218549810

Gene position: 2554056-2554673 (Clockwise)

Preceding gene: 218549809

Following gene: 218549812

Centisome position: 55.66

GC content: 48.38

Gene sequence:

>618_bases
ATGAAACAACATTTAAAGCAGGAGTTAACCCATTTTCTTGCCAGTTTGCCAGAAGACGAAAGAGTAGAGGCAATCAACGA
GTTTCGCCAGGCGATCCATAAAGTCAGCCCTTTCCGTGAGGAGCCGGTGGACTGCGTGCTCTGGGTAAAAAAAGAACAGC
TCAAGCCAAACAATTACAACCCCAATAATGTTGCACCACCAGAGAAAAGACTGTTACAGGTCTCTATAGAGACTGACGGC
TTTACCCAACCCATTGTCGTTTCGCCATCCAGCCAAAATGAGTATGAGATTGTCGATGGTTTCCACCGTCACCTGGTGGG
TAAAGAGAACGGTACACTAGGTGTAAGGCTAAAAGGTTATCTGCCAGTGACCTGTCTGGATGGCAATCGCCACGAACGCA
TCGCCGCAACTATTCGTCATAACCGCGCTCGTGGCCGCCACCAAATCACAGCCATGTCAGAAATCGTTCGTGAACTCAGC
CAGTTGGGATGGGACGACAATAAAATCGGCAAAGAGCTGGGTATGGACAGCGACGAAGTGTTGCGCCTGAAACAAATTAA
CGGCCTGCAAGAGTTATTTGCTGACCGTCAATATTCCCGTGCCTGGACAGTAAAATAA

Upstream 100 bases:

>100_bases
ATTACTGGTGCCGGGCACTGTCATTCAGCCCAACAAAATCTCAACATTATCAACGGTATAGCGAACGAATTAAAGCCAAA
CGCAAACTCTGGGGAATATT

Downstream 100 bases:

>100_bases
TTACAGCTGGCGCAGGCGTTCAGCTGCCGCCAGCAACGTCGATTCCTTCTTGGCAAAACAGAGACGAATGAGCTTATGGG
GGAATGGATCGGCGCAAAAT

Product: immunoglobulin-binding regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKQHLKQELTHFLASLPEDERVEAINEFRQAIHKVSPFREEPVDCVLWVKKEQLKPNNYNPNNVAPPEKRLLQVSIETDG
FTQPIVVSPSSQNEYEIVDGFHRHLVGKENGTLGVRLKGYLPVTCLDGNRHERIAATIRHNRARGRHQITAMSEIVRELS
QLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK

Sequences:

>Translated_205_residues
MKQHLKQELTHFLASLPEDERVEAINEFRQAIHKVSPFREEPVDCVLWVKKEQLKPNNYNPNNVAPPEKRLLQVSIETDG
FTQPIVVSPSSQNEYEIVDGFHRHLVGKENGTLGVRLKGYLPVTCLDGNRHERIAATIRHNRARGRHQITAMSEIVRELS
QLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK
>Mature_205_residues
MKQHLKQELTHFLASLPEDERVEAINEFRQAIHKVSPFREEPVDCVLWVKKEQLKPNNYNPNNVAPPEKRLLQVSIETDG
FTQPIVVSPSSQNEYEIVDGFHRHLVGKENGTLGVRLKGYLPVTCLDGNRHERIAATIRHNRARGRHQITAMSEIVRELS
QLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786817, Length=205, Percent_Identity=81.9512195121951, Blast_Score=358, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 23626; Mature: 23626

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHLKQELTHFLASLPEDERVEAINEFRQAIHKVSPFREEPVDCVLWVKKEQLKPNNYN
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCC
PNNVAPPEKRLLQVSIETDGFTQPIVVSPSSQNEYEIVDGFHRHLVGKENGTLGVRLKGY
CCCCCCCHHHEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECC
LPVTCLDGNRHERIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV
EEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
LRLKQINGLQELFADRQYSRAWTVK
HHHHHHCCHHHHHCCCHHCCEECCC
>Mature Secondary Structure
MKQHLKQELTHFLASLPEDERVEAINEFRQAIHKVSPFREEPVDCVLWVKKEQLKPNNYN
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCC
PNNVAPPEKRLLQVSIETDGFTQPIVVSPSSQNEYEIVDGFHRHLVGKENGTLGVRLKGY
CCCCCCCHHHEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECC
LPVTCLDGNRHERIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV
EEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
LRLKQINGLQELFADRQYSRAWTVK
HHHHHHCCHHHHHCCCHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]