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The map label for this gene is ybeQ [H]

Identifier: 218549781

GI number: 218549781

Start: 2525645

End: 2526622

Strand: Direct

Name: ybeQ [H]

Synonym: EFER_2462

Alternate gene names: 218549781

Gene position: 2525645-2526622 (Clockwise)

Preceding gene: 218549777

Following gene: 218549783

Centisome position: 55.04

GC content: 45.09

Gene sequence:

>978_bases
ATGATTTTTACATCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGAGATAGTGAAGC
ACAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAGTTGACTCTCCGGACGACGAAAAGGCCTTTTACTGGCTGA
AGCTGGCCGCTGAGCAAGGCCATTGTGAAGCACAATATTCCTTAGGGCGGAAATACTCCGAGGATAAAAGCTGTCATAAA
GATAATGAACAAGCCATCTTTTGGCTGAAAAAAGCAGCCCGACAAGGACATACTTTCGCTTCCAACGCCCTTGGCTGGAT
ACTGGATCGTGGAGAAGACCCCAACTATAAAGAAGCGGTTGTCTGGTATCAGATAGCCGCGGAGAGCGGAATGTCTTATG
CGCAAAATAATCTTGGGTGGATTTACAGAAATGGCAACGGAGTCACACAAGATTATGCGCAGGCATTGTTCTGGTACAAA
CAAGCTGCATTACAAGGCCATAGTTACGCACAAGACAATCTGGCCGATCTTTATGAAGACGGTAAAGGTGTTGCCCAAAA
CAAAGCTCTTGCCGCATTCTGGTATTTAAAAAGCGCACAGCAAGGTAATCGGCACGCTCAATTTCAAATTGCGTGGGATT
ATAACGTTGGCGAAGGGGTTGACCAGGACTATAAGCAAGCAATGTACTGGTATCTGAAGGCTGCCGCTCAGGAAAGCGTC
GACGCTTACGTTAACATCGGCTATATGTATAAACACGGTCAAAGCGTTGAGAAGAATTATCAGGCCGCCTTTGAATGGTT
TACGAAAGCCGCTGAATGCGATAACGCCACTGCCTGGTATAACCTTGCCATTATGTATCATTACGGAGAAGGAAGACCTG
TCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGTCATCCGGTACCAGGGATGTCAGTCAAAAAATCCGTGAG
ATTGAAGATTTACTGTAG

Upstream 100 bases:

>100_bases
ACTTTTCTGACGCGACATAATACGCATAAAATAAGACTTGCGCAAAAATGGAATACATAAAAATATAATATATTTTCTCC
GTAACCATAAGGAAATGATA

Downstream 100 bases:

>100_bases
AGATAAAAACAAGGGCCGGGGAATTTTATTCGGCCCAAATTTTCGTTATTGGCGTGCGAAATCAGATCATTAAGGCTCGA
ACGGGCGTCTCTGGAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIFTSSCCDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSAVDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSCHK
DNEQAIFWLKKAARQGHTFASNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYK
QAALQGHSYAQDNLADLYEDGKGVAQNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAAAQESV
DAYVNIGYMYKHGQSVEKNYQAAFEWFTKAAECDNATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQKIRE
IEDLL

Sequences:

>Translated_325_residues
MIFTSSCCDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSAVDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSCHK
DNEQAIFWLKKAARQGHTFASNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYK
QAALQGHSYAQDNLADLYEDGKGVAQNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAAAQESV
DAYVNIGYMYKHGQSVEKNYQAAFEWFTKAAECDNATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQKIRE
IEDLL
>Mature_325_residues
MIFTSSCCDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSAVDSPDDEKAFYWLKLAAEQGHCEAQYSLGRKYSEDKSCHK
DNEQAIFWLKKAARQGHTFASNALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYK
QAALQGHSYAQDNLADLYEDGKGVAQNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAAAQESV
DAYVNIGYMYKHGQSVEKNYQAAFEWFTKAAECDNATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQKIRE
IEDLL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=311, Percent_Identity=28.6173633440514, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI151301150, Length=289, Percent_Identity=27.681660899654, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI217330658, Length=164, Percent_Identity=32.3170731707317, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI217330656, Length=164, Percent_Identity=32.3170731707317, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=92.3076923076923, Blast_Score=617, Evalue=1e-178,
Organism=Escherichia coli, GI1786867, Length=129, Percent_Identity=37.984496124031, Blast_Score=78, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=317, Percent_Identity=25.2365930599369, Blast_Score=95, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6319410, Length=276, Percent_Identity=30.0724637681159, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355295, Length=311, Percent_Identity=29.903536977492, Blast_Score=114, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37271; Mature: 37271

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTSSCCDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSAVDSPDDEKAFYWLKLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGRKYSEDKSCHKDNEQAIFWLKKAARQGHTFASNALGWILDRGEDPNYKEAV
CCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCHHHEEECCCCCCHHHEE
VWYQIAAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYKQAALQGHSYAQDNLADLYED
EEEEEHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GKGVAQNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAAAQESV
CCCCHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
DAYVNIGYMYKHGQSVEKNYQAAFEWFTKAAECDNATAWYNLAIMYHYGEGRPVDLRQAL
HHEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQSSGTRDVSQKIREIEDLL
HHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFTSSCCDNLSIDEIIERAEKGDSEAQYIVGFYYNRDSAVDSPDDEKAFYWLKLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGRKYSEDKSCHKDNEQAIFWLKKAARQGHTFASNALGWILDRGEDPNYKEAV
CCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCHHHEEECCCCCCHHHEE
VWYQIAAESGMSYAQNNLGWIYRNGNGVTQDYAQALFWYKQAALQGHSYAQDNLADLYED
EEEEEHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GKGVAQNKALAAFWYLKSAQQGNRHAQFQIAWDYNVGEGVDQDYKQAMYWYLKAAAQESV
CCCCHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
DAYVNIGYMYKHGQSVEKNYQAAFEWFTKAAECDNATAWYNLAIMYHYGEGRPVDLRQAL
HHEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQSSGTRDVSQKIREIEDLL
HHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]