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The map label for this gene is ybeT [H]

Identifier: 218549777

GI number: 218549777

Start: 2521524

End: 2522078

Strand: Direct

Name: ybeT [H]

Synonym: EFER_2456

Alternate gene names: 218549777

Gene position: 2521524-2522078 (Clockwise)

Preceding gene: 218549774

Following gene: 218549781

Centisome position: 54.95

GC content: 43.96

Gene sequence:

>555_bases
ATGAATAAAAAATTAATGTATATATTCGCAATATTTATAGTTGCAGCAATAACCTGTATTAGCCAACCCAAGAAAACGAC
GTTGCGTGATAAAGCCATGGCGAATTATGCCTTTGATTATTTAAGCTCACCGGGCAACCTTCCATTCACCACGGCAGCAA
CGGAGCTTTCCGCGATTCATGGTCACTCAACGTCGCAATATCGCCTTGGTGAATTTTATCTTCATGGTAGCGGCGGTAAA
CCGCTGGATTATACACAGGCGAGGTACTGGTATGAGCAATCAGCGGAACAGGAAAATCCACGAGCGCAAAGTAAACTAGG
ATGGATCTACCTGAAAGGTTTGGGAGTCAATCCCGATACCCGTAAAGCAATTCTCTGGTATAAGGAAGCCGCTGAACAAG
GGCATGTTCATGCACAATACACGTTGGGTTTGATCTACAGAAACGGTACGGGCATTAGCACCAACAATTATGAAGCTCGC
AAATGGTTAAAACTGGCGGCAGAGCAACATTATAAAAATGCGGAAAGATTACTTGCTGAGCTTCCCGCACATTAA

Upstream 100 bases:

>100_bases
TGTTAATAATCCCTTAAGTGCATTAACTGACTACTTTTTTATTATTGATGAGTATAAACTTGACGCTTTCAAAATAAAAA
GAAAATCGAAGCATTCACAC

Downstream 100 bases:

>100_bases
CGTCGACTTTCACCCGAACAGATGGAGTATTTTCCCTATCAAACCAGCAAAGATAAAAATATAGAAAATAATTTTAATGA
TGCCCAGACAGCCCGGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGNLPFTTAATELSAIHGHSTSQYRLGEFYLHGSGGK
PLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVNPDTRKAILWYKEAAEQGHVHAQYTLGLIYRNGTGISTNNYEAR
KWLKLAAEQHYKNAERLLAELPAH

Sequences:

>Translated_184_residues
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGNLPFTTAATELSAIHGHSTSQYRLGEFYLHGSGGK
PLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVNPDTRKAILWYKEAAEQGHVHAQYTLGLIYRNGTGISTNNYEAR
KWLKLAAEQHYKNAERLLAELPAH
>Mature_184_residues
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGNLPFTTAATELSAIHGHSTSQYRLGEFYLHGSGGK
PLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVNPDTRKAILWYKEAAEQGHVHAQYTLGLIYRNGTGISTNNYEAR
KWLKLAAEQHYKNAERLLAELPAH

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeQ [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=132, Percent_Identity=34.0909090909091, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1786867, Length=184, Percent_Identity=91.8478260869565, Blast_Score=355, Evalue=1e-100,
Organism=Escherichia coli, GI87081769, Length=112, Percent_Identity=38.3928571428571, Blast_Score=79, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355295, Length=114, Percent_Identity=37.719298245614, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 20865; Mature: 20865

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGNLPFTTAATELSAIH
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
GHSTSQYRLGEFYLHGSGGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVNPDT
CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCEEEEEEECCCCCC
RKAILWYKEAAEQGHVHAQYTLGLIYRNGTGISTNNYEARKWLKLAAEQHYKNAERLLAE
CCEEEEEHHHHHCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPAH
CCCC
>Mature Secondary Structure
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMANYAFDYLSSPGNLPFTTAATELSAIH
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC
GHSTSQYRLGEFYLHGSGGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVNPDT
CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCEEEEEEECCCCCC
RKAILWYKEAAEQGHVHAQYTLGLIYRNGTGISTNNYEARKWLKLAAEQHYKNAERLLAE
CCEEEEEHHHHHCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPAH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]