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The map label for this gene is 218549314

Identifier: 218549314

GI number: 218549314

Start: 2027561

End: 2028160

Strand: Reverse

Name: 218549314

Synonym: EFER_1976

Alternate gene names: NA

Gene position: 2028160-2027561 (Counterclockwise)

Preceding gene: 218549320

Following gene: 218549313

Centisome position: 44.2

GC content: 47.83

Gene sequence:

>600_bases
GTGATTCTTATTTTTATCGCCACTGGAGCGGCATTGCCGGTATTTTTGTTTGGTACGGATCATGCTGTGTTCAGGGCCAC
AACAAGATGGACTAATCATATGAGCAGCCAAAAATACGGCGGCAGTATTGCGCCTCGCGAGAGAATTAATATCCACTATG
TGCCACGCACTAATGATCAGGCCGCTGAAGTTGAGCTCCCACTTAATATTGTGGTGGTTGGCGACACAAAAGGCGCTCTG
GATGAAACACCTATTGATGAACGCCAGGCGGTGTCCATTAATAAAAACAATTTCCGTTCTGTAATGGCAGAAGTCGGGAT
CAAAACCACGGTGACGGTTGCTGACAAGCTCAGTGAAAAACCTGACGGCGAAATGAGTGTCACCCTGGACATTAAATCAC
TGGATGATTTTTCACCAGACAATATCGCAAGGCAAGTGCCCGAAATGAAGAAAATACTGGAACTGCGTGAGGCTCTCGTT
GCTTTACGTGGACCAATGGGGAATGTCCCTGCATTCCGCGCCCAGCTTCAGGCTTTGCTGGATAACGAAGAAACCCGTGA
GCAGCTCCTCCGGGAACTGGATATCATCGATCAGAAATAA

Upstream 100 bases:

>100_bases
GTTTAAGCATATTGTTGAAAGGAGAATACATCTGTTTCAAACAAAGAAAAAGGTTTTTAAAATTTATTTTCAGGCGTAGA
ATGCGGAGCAATGATAATTT

Downstream 100 bases:

>100_bases
GGAAGGATGTTGGTATGTCATTACAGGAAGAGCTTACTTCTCCACTTGCTGAATCGGTTGCTCCACAGCACTCTCTGCTG
GATGAAATCATGTCCAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Protein ImpB; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MILIFIATGAALPVFLFGTDHAVFRATTRWTNHMSSQKYGGSIAPRERINIHYVPRTNDQAAEVELPLNIVVVGDTKGAL
DETPIDERQAVSINKNNFRSVMAEVGIKTTVTVADKLSEKPDGEMSVTLDIKSLDDFSPDNIARQVPEMKKILELREALV
ALRGPMGNVPAFRAQLQALLDNEETREQLLRELDIIDQK

Sequences:

>Translated_199_residues
MILIFIATGAALPVFLFGTDHAVFRATTRWTNHMSSQKYGGSIAPRERINIHYVPRTNDQAAEVELPLNIVVVGDTKGAL
DETPIDERQAVSINKNNFRSVMAEVGIKTTVTVADKLSEKPDGEMSVTLDIKSLDDFSPDNIARQVPEMKKILELREALV
ALRGPMGNVPAFRAQLQALLDNEETREQLLRELDIIDQK
>Mature_199_residues
MILIFIATGAALPVFLFGTDHAVFRATTRWTNHMSSQKYGGSIAPRERINIHYVPRTNDQAAEVELPLNIVVVGDTKGAL
DETPIDERQAVSINKNNFRSVMAEVGIKTTVTVADKLSEKPDGEMSVTLDIKSLDDFSPDNIARQVPEMKKILELREALV
ALRGPMGNVPAFRAQLQALLDNEETREQLLRELDIIDQK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22139; Mature: 22139

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIFIATGAALPVFLFGTDHAVFRATTRWTNHMSSQKYGGSIAPRERINIHYVPRTNDQ
CEEEEEECCCCCEEEEEECCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCC
AAEVELPLNIVVVGDTKGALDETPIDERQAVSINKNNFRSVMAEVGIKTTVTVADKLSEK
CEEEECCEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHHCCC
PDGEMSVTLDIKSLDDFSPDNIARQVPEMKKILELREALVALRGPMGNVPAFRAQLQALL
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DNEETREQLLRELDIIDQK
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILIFIATGAALPVFLFGTDHAVFRATTRWTNHMSSQKYGGSIAPRERINIHYVPRTNDQ
CEEEEEECCCCCEEEEEECCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCC
AAEVELPLNIVVVGDTKGALDETPIDERQAVSINKNNFRSVMAEVGIKTTVTVADKLSEK
CEEEECCEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHHCCC
PDGEMSVTLDIKSLDDFSPDNIARQVPEMKKILELREALVALRGPMGNVPAFRAQLQALL
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DNEETREQLLRELDIIDQK
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA