| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is 218549313
Identifier: 218549313
GI number: 218549313
Start: 2026065
End: 2027546
Strand: Reverse
Name: 218549313
Synonym: EFER_1975
Alternate gene names: NA
Gene position: 2027546-2026065 (Counterclockwise)
Preceding gene: 218549314
Following gene: 218549312
Centisome position: 44.19
GC content: 47.77
Gene sequence:
>1482_bases ATGTCATTACAGGAAGAGCTTACTTCTCCACTTGCTGAATCGGTTGCTCCACAGCACTCTCTGCTGGATGAAATCATGTC CAGAACCCGCATCCAGCCTGAGTCAGATGGTTATGATGTAGCCCGGCAGGGCGTTGTGGCATTTATCAGAAGTATTCTGA CATCTGATACCGGTGATGCAATTAATCGGCTGGCCGTAGACAGGATGATTACAGTACTGGACCAAAAACTCAGTGCTCAG ACAGACGAGATCCTGCACTCTGAACCCGTACAACAGCTGGAATCATTCTGGCGTTCAATGAAGTTGCTGGTTGACAGAAC CGATTTCAAAGAAAATATCAAAATTCATTTGATCCACGCCACCAAAGAAGAATTGCTGGAAGATTTTGAATTTGCTCCAG AAATTGTTCAGTCTGGCTTTTACAAGCATATTTACTCATCGGGATATGGCCAGTTTGGTGGCGAACCCGTGGCTGCCGTG GTGGGGGCTTATGAATTTAAAAACACCACGCCGGATATGAAGCTGTTGCAGTATGTCAGTGCTGTAGGATCAATGGCTCA TGCGCCGTTTTTGTCTTCCGTGGCACCGCAATTTTTTGGACTTAATTCATATACCGAACTTCCGACCATTAAAGATCTTT ATTCTGTCTTTGAGGGCCCGGCTTATACAAAATGGCGTGCGCTGCGTGAGTCTGAAGATTCTCGTTATCTGGGGCTCACG GCTCCCCGTGTCCTGCTGCGACTTCCTTATTCTCCAACGGAAAATCCGGTTAAATCTTTCTGCTATGAGGAAGATGTCCG TCATAGACATGAAGACTATTTATGGGGAAATACAGCATTTTTGCTGGCCTGTAGCCTGACGGACTCGTTTTCAAAATATC GCTGGTGTCCCAACATCATCGGGCCACAGAGTGGCGGTGCAGTAAAAGACTTACCTGTACATTTATATGAATCACTTGGT CAGATACAAGCCAAAATTCCAACCGAAGTCCTGATTACTGATCGCCGGGAATATGAACTGGCAGAAGAGGGTTTTATCAG CCTGACCATGCGTAAGGACAGTGATAACGCATGTTTCTTCTCCGCCAACTCGGTGCAGAAACCGAAAGTGTTTCCAAACA CCAGGGAGGGGAAAGAGGCCGAAACTAACTACAAACTGGGTACTCAGTTGCCCTATATGTTCATTATTACCCGCCTCGCC CATTTTATTAAAGTGTTGCAACGTGAGCAGATTGGCTCCTGGAAAGAACGTTCCGATTTGGAAAGGGAACTGAATATCTG GATTCGCCAGTATGTGGCCGACCAGGAAAACCCGCCAGCAGATGTGCGCAGCCGCAAACCGCTCAGGGCTGCGAAGATTG AAGTGCAGGATGTTGAAGGTGAACCGGGCTGGTACAAGGTCGCGCTCGCCGTGAGGCCGCACTTTAAATATATGGGGGCG ACATTTGAACTTGCCCTGGTCGGACGTCTGGACAAGGAATAA
Upstream 100 bases:
>100_bases TCCGCGCCCAGCTTCAGGCTTTGCTGGATAACGAAGAAACCCGTGAGCAGCTCCTCCGGGAACTGGATATCATCGATCAG AAATAAGGAAGGATGTTGGT
Downstream 100 bases:
>100_bases TTATGAAGTATCAGGACCGGGGATTACGGGCTTCGGGAAGTTTATTTGAACGTGTACGTGAAGCGGCCCGATCACCGGTT CCTCGTCCTGTTAATGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSLQEELTSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDAINRLAVDRMITVLDQKLSAQ TDEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHATKEELLEDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAV VGAYEFKNTTPDMKLLQYVSAVGSMAHAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLT APRVLLRLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNIIGPQSGGAVKDLPVHLYESLG QIQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFFSANSVQKPKVFPNTREGKEAETNYKLGTQLPYMFIITRLA HFIKVLQREQIGSWKERSDLERELNIWIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGA TFELALVGRLDKE
Sequences:
>Translated_493_residues MSLQEELTSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDAINRLAVDRMITVLDQKLSAQ TDEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHATKEELLEDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAV VGAYEFKNTTPDMKLLQYVSAVGSMAHAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLT APRVLLRLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNIIGPQSGGAVKDLPVHLYESLG QIQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFFSANSVQKPKVFPNTREGKEAETNYKLGTQLPYMFIITRLA HFIKVLQREQIGSWKERSDLERELNIWIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGA TFELALVGRLDKE >Mature_492_residues SLQEELTSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDAINRLAVDRMITVLDQKLSAQT DEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHATKEELLEDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAVV GAYEFKNTTPDMKLLQYVSAVGSMAHAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLTA PRVLLRLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNIIGPQSGGAVKDLPVHLYESLGQ IQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFFSANSVQKPKVFPNTREGKEAETNYKLGTQLPYMFIITRLAH FIKVLQREQIGSWKERSDLERELNIWIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGAT FELALVGRLDKE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56173; Mature: 56042
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQEELTSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDA CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH INRLAVDRMITVLDQKLSAQTDEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC TKEELLEDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAVVGAYEFKNTTPDMKLLQYVS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH AVGSMAHAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEECCC APRVLLRLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNII HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCC GPQSGGAVKDLPVHLYESLGQIQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFF CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCEEEEEEEECCCCEEEE SANSVQKPKVFPNTREGKEAETNYKLGTQLPYMFIITRLAHFIKVLQREQIGSWKERSDL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ERELNIWIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGA HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCEEEEEEEECCCHHHHCC TFELALVGRLDKE EEEEEEECCCCCC >Mature Secondary Structure SLQEELTSPLAESVAPQHSLLDEIMSRTRIQPESDGYDVARQGVVAFIRSILTSDTGDA CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH INRLAVDRMITVLDQKLSAQTDEILHSEPVQQLESFWRSMKLLVDRTDFKENIKIHLIHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC TKEELLEDFEFAPEIVQSGFYKHIYSSGYGQFGGEPVAAVVGAYEFKNTTPDMKLLQYVS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH AVGSMAHAPFLSSVAPQFFGLNSYTELPTIKDLYSVFEGPAYTKWRALRESEDSRYLGLT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEECCC APRVLLRLPYSPTENPVKSFCYEEDVRHRHEDYLWGNTAFLLACSLTDSFSKYRWCPNII HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCC GPQSGGAVKDLPVHLYESLGQIQAKIPTEVLITDRREYELAEEGFISLTMRKDSDNACFF CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCEEEEEEEECCCCEEEE SANSVQKPKVFPNTREGKEAETNYKLGTQLPYMFIITRLAHFIKVLQREQIGSWKERSDL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ERELNIWIRQYVADQENPPADVRSRKPLRAAKIEVQDVEGEPGWYKVALAVRPHFKYMGA HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCEEEEEEEECCCHHHHCC TFELALVGRLDKE EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA