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The map label for this gene is 218549308

Identifier: 218549308

GI number: 218549308

Start: 2020952

End: 2021485

Strand: Reverse

Name: 218549308

Synonym: EFER_1970

Alternate gene names: NA

Gene position: 2021485-2020952 (Counterclockwise)

Preceding gene: 218549309

Following gene: 218549307

Centisome position: 44.05

GC content: 50.75

Gene sequence:

>534_bases
ATGACTGGGCGTTTTTTCCGTGTCTGCGCAATGGTGATGCTGTTCAACATCACTCTGACGGGATGCGAAACAGTGAAAAA
AATCAGTCAGGTGATCAAAAACCCGGATATCCCGGTTGGGAAGATAACTGAACAACCCTCTGAGGTTACGGTTACGTTGC
TGACCGAACCGGACACGAATACCAATGCGGACGGCGAAGCAGCGGCTGTGGATGTACAACTGGTCTATCTGAGTGACGAC
TCGAAGTTGCAGGCTGCGGACTATGACCAGATTGCCAGTACGCCACTGCCGGATGTGCTGGGTAAAAACTATATCGATCA
TCAGGATTTTAATCTGCTGCCGGACACCATCAAAACCCTGCCGCCAGTGAAGCTGGATGAGAAAACGCAGTTTATTGGCG
TTGTGGCCTATTTTTCTGATGACCAGGCCACCGAGTGGAAACAGATAGAGCCGGTGGATGGCGTCGGCCACAACTACCGC
CTGCTGGTACATGTACGACAGGGCAGTATCGAAATGAAAAAAGAGGACAACTGA

Upstream 100 bases:

>100_bases
TGGCGTCAGATCGCCAGCAGGGGTTTGAGATGTTGTTTAACGAAGTCTACGCCCAGGTCTATGACCGGGTTCTTCGTGAA
AAACAGCGGGAGCCAGAAGC

Downstream 100 bases:

>100_bases
TAATGGCGACCATTAAAAATAAGGTGATCTGGCAGGAGGGGCTATTTGTTCAGCCACAGCATTTTCAGCAACAGCAACGT
TATAACGATTATATCCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein Family; Type VI Secretion Lipoprotein Family Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTGRFFRVCAMVMLFNITLTGCETVKKISQVIKNPDIPVGKITEQPSEVTVTLLTEPDTNTNADGEAAAVDVQLVYLSDD
SKLQAADYDQIASTPLPDVLGKNYIDHQDFNLLPDTIKTLPPVKLDEKTQFIGVVAYFSDDQATEWKQIEPVDGVGHNYR
LLVHVRQGSIEMKKEDN

Sequences:

>Translated_177_residues
MTGRFFRVCAMVMLFNITLTGCETVKKISQVIKNPDIPVGKITEQPSEVTVTLLTEPDTNTNADGEAAAVDVQLVYLSDD
SKLQAADYDQIASTPLPDVLGKNYIDHQDFNLLPDTIKTLPPVKLDEKTQFIGVVAYFSDDQATEWKQIEPVDGVGHNYR
LLVHVRQGSIEMKKEDN
>Mature_176_residues
TGRFFRVCAMVMLFNITLTGCETVKKISQVIKNPDIPVGKITEQPSEVTVTLLTEPDTNTNADGEAAAVDVQLVYLSDDS
KLQAADYDQIASTPLPDVLGKNYIDHQDFNLLPDTIKTLPPVKLDEKTQFIGVVAYFSDDQATEWKQIEPVDGVGHNYRL
LVHVRQGSIEMKKEDN

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19699; Mature: 19567

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRFFRVCAMVMLFNITLTGCETVKKISQVIKNPDIPVGKITEQPSEVTVTLLTEPDTN
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCC
TNADGEAAAVDVQLVYLSDDSKLQAADYDQIASTPLPDVLGKNYIDHQDFNLLPDTIKTL
CCCCCCEEEEEEEEEEECCCCCEECCCCHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHC
PPVKLDEKTQFIGVVAYFSDDQATEWKQIEPVDGVGHNYRLLVHVRQGSIEMKKEDN
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCC
>Mature Secondary Structure 
TGRFFRVCAMVMLFNITLTGCETVKKISQVIKNPDIPVGKITEQPSEVTVTLLTEPDTN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCC
TNADGEAAAVDVQLVYLSDDSKLQAADYDQIASTPLPDVLGKNYIDHQDFNLLPDTIKTL
CCCCCCEEEEEEEEEEECCCCCEECCCCHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHC
PPVKLDEKTQFIGVVAYFSDDQATEWKQIEPVDGVGHNYRLLVHVRQGSIEMKKEDN
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA