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The map label for this gene is pgaD [H]

Identifier: 218549247

GI number: 218549247

Start: 1957596

End: 1958009

Strand: Direct

Name: pgaD [H]

Synonym: EFER_1907

Alternate gene names: 218549247

Gene position: 1957596-1958009 (Clockwise)

Preceding gene: 218549246

Following gene: 218549253

Centisome position: 42.66

GC content: 39.61

Gene sequence:

>414_bases
ATGAATAATTTGATTATTACCACTAAGCGCAGCCCGTTACGGAAATTATTTGATTATCTGGCGACCTTTGTATTATGGAT
TCTGTTCGCATTTTTTATCTTTCATTTTCTTGATGCAATGCTAAGTGGTGTTTTCTGGGAAAGTGAAGCAAGGAACAGAT
TGCAATTTTACTTCATGTTGGCTGTCGCCAATGCCATCGTGCTCATTCTCTGGGCGTTCTATAATATGCTGCGTTTTCAG
AAGCAGCAGTATAATGCGGCTCTTCATTATAATTCCCGGCAATTTGCCCAGAGTCTGGGGATATCAGAAGAGTTGTATCA
GCAAATACAGAACAGCCGCAAAATGCGCGTACATTTTAATAACCACGGGCAAATTAAATTGGTCATTGCCGAAAAATTGT
TGGGAAGAATGTAA

Upstream 100 bases:

>100_bases
CTGGCAACGACTCTGGTGTCTTTTACCCGGGTTATGCTGGTGCGTAAAAAGAAACGCGCCCGTTGGATAAGCCCGGATCG
TGGAATAATGCGAGGTTAAT

Downstream 100 bases:

>100_bases
ACAAAGCCCGGTTCGCCCGGGCTCTGCGCTTATAACACACTTAACTGTAGGCATGTAGCGTACGTTGGCAAAGTGCCGAA
CGTACGCAATCCTCTTTACC

Product: PGA biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNNLIITTKRSPLRKLFDYLATFVLWILFAFFIFHFLDAMLSGVFWESEARNRLQFYFMLAVANAIVLILWAFYNMLRFQ
KQQYNAALHYNSRQFAQSLGISEELYQQIQNSRKMRVHFNNHGQIKLVIAEKLLGRM

Sequences:

>Translated_137_residues
MNNLIITTKRSPLRKLFDYLATFVLWILFAFFIFHFLDAMLSGVFWESEARNRLQFYFMLAVANAIVLILWAFYNMLRFQ
KQQYNAALHYNSRQFAQSLGISEELYQQIQNSRKMRVHFNNHGQIKLVIAEKLLGRM
>Mature_137_residues
MNNLIITTKRSPLRKLFDYLATFVLWILFAFFIFHFLDAMLSGVFWESEARNRLQFYFMLAVANAIVLILWAFYNMLRFQ
KQQYNAALHYNSRQFAQSLGISEELYQQIQNSRKMRVHFNNHGQIKLVIAEKLLGRM

Specific function: Required for the synthesis of poly-beta-1,6-N-acetyl-D- glucosamine (PGA), a biofilm adhesin polysaccharide. May assist the glycosyltransferase PgaC in the polymerization of PGA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787258, Length=136, Percent_Identity=62.5, Blast_Score=184, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16393; Mature: 16393

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLIITTKRSPLRKLFDYLATFVLWILFAFFIFHFLDAMLSGVFWESEARNRLQFYFML
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVANAIVLILWAFYNMLRFQKQQYNAALHYNSRQFAQSLGISEELYQQIQNSRKMRVHFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEEC
NHGQIKLVIAEKLLGRM
CCCEEEEEHHHHHHCCC
>Mature Secondary Structure
MNNLIITTKRSPLRKLFDYLATFVLWILFAFFIFHFLDAMLSGVFWESEARNRLQFYFML
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVANAIVLILWAFYNMLRFQKQQYNAALHYNSRQFAQSLGISEELYQQIQNSRKMRVHFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCEEEEEEC
NHGQIKLVIAEKLLGRM
CCCEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]