Click here to switch to the map view.

The map label for this gene is ynbA [H]

Identifier: 218548945

GI number: 218548945

Start: 1636813

End: 1637418

Strand: Reverse

Name: ynbA [H]

Synonym: EFER_1593

Alternate gene names: 218548945

Gene position: 1637418-1636813 (Counterclockwise)

Preceding gene: 218548946

Following gene: 218548944

Centisome position: 35.68

GC content: 45.05

Gene sequence:

>606_bases
ATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCATGTTAC
AGCGAATCACATCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGTGGCACGACCCATCC
TCTTTTTGCTATTGCCCATCGTGCTTTTTGTCCGTATGGCACTCAATGCGCTGGATGGCATGATGGCGCGTGAGTGTAAT
CAGCAAACACGTCTTGGGGCGATTTTGAATGAAACTGGCGATGTTATTTCCGATATTGCGCTTTATTTACCGTTTTTATT
TTTACCGGAAAGTAACGCATCACTCGTAATACTCATGTTATTTTGCACCATATTGACTGAGTTTTGCGGTTTACTCGCGC
AGACGATTAACGGTATTCGCAGTTATGCCGGTCCATTTGGCAAAAGCGATCGCGCGTTAATATTTGGGTTGTGGGGGCTG
GCCGTTGCCATTTATCCACAGTGGATGCAATGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGC
GATTAATCGTTGTCGGAGTGTGCTTTTTATGAGTGCTGAAAGATAA

Upstream 100 bases:

>100_bases
CCTTGATATATTCTGAATTTTTAATGAAGTGTCGTGTTGCGATATCTCCGTCAGGGGAATTGATGCACCATAGCGCAAAC
CGAATTATCAAGGATTGATA

Downstream 100 bases:

>100_bases
TGCTGGAAAAATCTCTGGCAATACTTTTCGTGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGGTATGGCGGTTA
CCAAAGAGAAAAGGAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLVARPILFLLLPIVLFVRMALNALDGMMARECN
QQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGIRSYAGPFGKSDRALIFGLWGL
AVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLFMSAER

Sequences:

>Translated_201_residues
MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLVARPILFLLLPIVLFVRMALNALDGMMARECN
QQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGIRSYAGPFGKSDRALIFGLWGL
AVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLFMSAER
>Mature_200_residues
TLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLVARPILFLLLPIVLFVRMALNALDGMMARECNQ
QTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGIRSYAGPFGKSDRALIFGLWGLA
VAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLFMSAER

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081901, Length=200, Percent_Identity=97, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22676; Mature: 22544

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLVARPILFLLLPI
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLFVRMALNALDGMMARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FCTILTEFCGLLAQTINGIRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLLWTAINRCRSVLFMSAER
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLVARPILFLLLPI
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLFVRMALNALDGMMARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FCTILTEFCGLLAQTINGIRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLLWTAINRCRSVLFMSAER
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]