Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is 218548939
Identifier: 218548939
GI number: 218548939
Start: 1627006
End: 1627863
Strand: Reverse
Name: 218548939
Synonym: EFER_1587
Alternate gene names: NA
Gene position: 1627863-1627006 (Counterclockwise)
Preceding gene: 218548940
Following gene: 218548938
Centisome position: 35.48
GC content: 38.93
Gene sequence:
>858_bases ATGGACTTAAATTCTGAAGAATACAAAAAATTTAGTCACACATTTAAAGATACAGAAGAAGAAATTATCGTTCTTCTTAG TGATGCTGGCGGTGGTGCCGGTATGAGCGGCGGCGATAATTACTGGACAGCGACTCAACACATACTTGCCTGGAAGAGTG TGACAACAGGAGAAATCCACGTAGGAGATGGACGACTCAACTGGTTGATAACAGAAGAAAATAAGAAAATTCATGGTTGT GCATGGCCGTTTAATATGCAGTCTGGTGGTATATATCGCCTGAGAGTACGAGACTTGATTGACAGGACTGCGCCGGAAGG GAAGTTAACCGAGTTTTATAATCGATTTTATGTCCTTGAAGTCCTTGAAAATCATGTTCAGTGCGAGGAACTACTCAATA TACAGAAAGAATATCGCGAGCCGGTTGTTGTTGAAGAGCAGCAATTTGGGACTTTCGTGCTTAATAAAGACTACTCCTAT TTTAGCGGGGAAGTGAAATGGAATGATCAGAATATTTCTGTCTCTATGGAAGTAGATAAGAATGATAGATGTACATGGGA ACAGGTTTTTGAAAATCTGCGATTTTTATTCAACAATATGCAGCAAAAGGACCAAGAGTTTAGGCAATATGCCGCAGAAC AATTAACTGAATTGGCCAATGACTGGCTTCAAGATGAAGAAGATGAAGAAATTACAGAAGATATGTTTGTTAGCAGAATA AATCTTGTTGAGTTGACTATGGATTATAATGGAGATTATTCATTATATTATAACGATGATGATATGTTCTGGGGTCACAT TATTGATATTGTGGGTAGTATTGAAACAGGGCCGACGAGTGCGAGTATAGCGGGTTAA
Upstream 100 bases:
>100_bases AGGCTTGTGGTGTACGCAGTTATTTTTGAATTATCGATAACACATTCATTACTGCGACACTCAATGTTATTGATCAAATT TATTTTTCACCGGGGCAAAA
Downstream 100 bases:
>100_bases TTTATTGCCAGACATTTTATCAATGGGTATGTATACTCTGGCTACTACGAGTTACTGGACTAAATTCGAGTGATGTTTTG TCCTGTAACTCGTAATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MDLNSEEYKKFSHTFKDTEEEIIVLLSDAGGGAGMSGGDNYWTATQHILAWKSVTTGEIHVGDGRLNWLITEENKKIHGC AWPFNMQSGGIYRLRVRDLIDRTAPEGKLTEFYNRFYVLEVLENHVQCEELLNIQKEYREPVVVEEQQFGTFVLNKDYSY FSGEVKWNDQNISVSMEVDKNDRCTWEQVFENLRFLFNNMQQKDQEFRQYAAEQLTELANDWLQDEEDEEITEDMFVSRI NLVELTMDYNGDYSLYYNDDDMFWGHIIDIVGSIETGPTSASIAG
Sequences:
>Translated_285_residues MDLNSEEYKKFSHTFKDTEEEIIVLLSDAGGGAGMSGGDNYWTATQHILAWKSVTTGEIHVGDGRLNWLITEENKKIHGC AWPFNMQSGGIYRLRVRDLIDRTAPEGKLTEFYNRFYVLEVLENHVQCEELLNIQKEYREPVVVEEQQFGTFVLNKDYSY FSGEVKWNDQNISVSMEVDKNDRCTWEQVFENLRFLFNNMQQKDQEFRQYAAEQLTELANDWLQDEEDEEITEDMFVSRI NLVELTMDYNGDYSLYYNDDDMFWGHIIDIVGSIETGPTSASIAG >Mature_285_residues MDLNSEEYKKFSHTFKDTEEEIIVLLSDAGGGAGMSGGDNYWTATQHILAWKSVTTGEIHVGDGRLNWLITEENKKIHGC AWPFNMQSGGIYRLRVRDLIDRTAPEGKLTEFYNRFYVLEVLENHVQCEELLNIQKEYREPVVVEEQQFGTFVLNKDYSY FSGEVKWNDQNISVSMEVDKNDRCTWEQVFENLRFLFNNMQQKDQEFRQYAAEQLTELANDWLQDEEDEEITEDMFVSRI NLVELTMDYNGDYSLYYNDDDMFWGHIIDIVGSIETGPTSASIAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33186; Mature: 33186
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLNSEEYKKFSHTFKDTEEEIIVLLSDAGGGAGMSGGDNYWTATQHILAWKSVTTGEIH CCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCCCEEE VGDGRLNWLITEENKKIHGCAWPFNMQSGGIYRLRVRDLIDRTAPEGKLTEFYNRFYVLE ECCCEEEEEEEECCCEEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH VLENHVQCEELLNIQKEYREPVVVEEQQFGTFVLNKDYSYFSGEVKWNDQNISVSMEVDK HHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCEEECEEEECCCCEEEEEEECC NDRCTWEQVFENLRFLFNNMQQKDQEFRQYAAEQLTELANDWLQDEEDEEITEDMFVSRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHE NLVELTMDYNGDYSLYYNDDDMFWGHIIDIVGSIETGPTSASIAG EEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDLNSEEYKKFSHTFKDTEEEIIVLLSDAGGGAGMSGGDNYWTATQHILAWKSVTTGEIH CCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCCCEEE VGDGRLNWLITEENKKIHGCAWPFNMQSGGIYRLRVRDLIDRTAPEGKLTEFYNRFYVLE ECCCEEEEEEEECCCEEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH VLENHVQCEELLNIQKEYREPVVVEEQQFGTFVLNKDYSYFSGEVKWNDQNISVSMEVDK HHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCEEECEEEECCCCEEEEEEECC NDRCTWEQVFENLRFLFNNMQQKDQEFRQYAAEQLTELANDWLQDEEDEEITEDMFVSRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHE NLVELTMDYNGDYSLYYNDDDMFWGHIIDIVGSIETGPTSASIAG EEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA