Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
---|---|
Accession | NC_011740 |
Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is 218548925
Identifier: 218548925
GI number: 218548925
Start: 1605041
End: 1605910
Strand: Reverse
Name: 218548925
Synonym: EFER_1571
Alternate gene names: NA
Gene position: 1605910-1605041 (Counterclockwise)
Preceding gene: 218548934
Following gene: 218548924
Centisome position: 35.0
GC content: 36.67
Gene sequence:
>870_bases GTGATAAAAAAAACACTACTGGCAGTGACTATTTCTACAACGCTTATTTCTGGGGTGGCTTTCGCTGCAGAAGGTAATGA CACTGGCGTTCTGACTTCTGCAACTACAGCACCATCGGTTGGTTATCGACCTGTTGCTGTTGCAGGGGAAGAAGGTTTGG AGGTAAAGGGAAAGTTGTATATAGGTCAGACGTTAAGAATAGATAAATTATTTTATACTGATAAAGACGGCGATGGTATT GATAATACCACAGGAAAGGGAGAATCTGTTCTTGATAAATCTGAGATTAAATGGTTTCTGATTAGTAAAAATGTAAATAA TCCTGACTTAAGTGGTACTCCATCACATTCAGGTACACAATTTGAAATTCCAAAAAATGCCTCTCAGAGTGTAATCTGGA TTACGTATAAAGTCGCTGCAAGTGCAGGTCATCCTTATCAGGCATTCTCAACACATAAAATTAAATTAACGTCAAAGATT AAAGGCCTTGAAGGAGGCACAGATGGTATCATTACGAACCGTGCTTCAAATGTAAGTATTATAATAAATAATCCGGGAGA TAAAAATCCATCTAACGAATTGAATGGTACTGACTCAATAAACTCTCCAATTGTTGGCGCAACCTTATCTACAAAGTGTT CTTTCAAAGATGACGAAAAGTCTAATGCAAGCAATTGTGATTCGGAAGGTTATTCATTTCAGTGGTTTAGCGCAAATGAG TTGAATGGAATATATACAAAAATAGATAACGCATCAAATTCGACATATACAATTCCATCGGATCAACAAAATCTTTATTT CAAAGTCGAACTTACACCGTTGACTATGAATGACAGTAAAACACCTCCTGTAGTCGTCAAAAAATCCTAA
Upstream 100 bases:
>100_bases TGAAGAGCATTTAAAACCGCATAGTATCGTGCAGAGGGATGTCATTCTTAAATTTTCCCTCATAAGGACATTTCTTCATA ACTAACAAAAGGGCTTTATC
Downstream 100 bases:
>100_bases TTTATTCGGGATAATTCCAGTTGCAGCATATGCAACTCAAAGTATGACGAGTATAGCAAAATTAAAATGAGCTCTTTTAT AAGGGAAGGGCTCTTTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MIKKTLLAVTISTTLISGVAFAAEGNDTGVLTSATTAPSVGYRPVAVAGEEGLEVKGKLYIGQTLRIDKLFYTDKDGDGI DNTTGKGESVLDKSEIKWFLISKNVNNPDLSGTPSHSGTQFEIPKNASQSVIWITYKVAASAGHPYQAFSTHKIKLTSKI KGLEGGTDGIITNRASNVSIIINNPGDKNPSNELNGTDSINSPIVGATLSTKCSFKDDEKSNASNCDSEGYSFQWFSANE LNGIYTKIDNASNSTYTIPSDQQNLYFKVELTPLTMNDSKTPPVVVKKS
Sequences:
>Translated_289_residues MIKKTLLAVTISTTLISGVAFAAEGNDTGVLTSATTAPSVGYRPVAVAGEEGLEVKGKLYIGQTLRIDKLFYTDKDGDGI DNTTGKGESVLDKSEIKWFLISKNVNNPDLSGTPSHSGTQFEIPKNASQSVIWITYKVAASAGHPYQAFSTHKIKLTSKI KGLEGGTDGIITNRASNVSIIINNPGDKNPSNELNGTDSINSPIVGATLSTKCSFKDDEKSNASNCDSEGYSFQWFSANE LNGIYTKIDNASNSTYTIPSDQQNLYFKVELTPLTMNDSKTPPVVVKKS >Mature_289_residues MIKKTLLAVTISTTLISGVAFAAEGNDTGVLTSATTAPSVGYRPVAVAGEEGLEVKGKLYIGQTLRIDKLFYTDKDGDGI DNTTGKGESVLDKSEIKWFLISKNVNNPDLSGTPSHSGTQFEIPKNASQSVIWITYKVAASAGHPYQAFSTHKIKLTSKI KGLEGGTDGIITNRASNVSIIINNPGDKNPSNELNGTDSINSPIVGATLSTKCSFKDDEKSNASNCDSEGYSFQWFSANE LNGIYTKIDNASNSTYTIPSDQQNLYFKVELTPLTMNDSKTPPVVVKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30932; Mature: 30932
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKTLLAVTISTTLISGVAFAAEGNDTGVLTSATTAPSVGYRPVAVAGEEGLEVKGKLY CCCCEEEEEEEEHHHHCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE IGQTLRIDKLFYTDKDGDGIDNTTGKGESVLDKSEIKWFLISKNVNNPDLSGTPSHSGTQ ECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEE FEIPKNASQSVIWITYKVAASAGHPYQAFSTHKIKLTSKIKGLEGGTDGIITNRASNVSI EECCCCCCCEEEEEEEEEEECCCCCEECCCEEEEEEEEEECCCCCCCCCEEEECCCCEEE IINNPGDKNPSNELNGTDSINSPIVGATLSTKCSFKDDEKSNASNCDSEGYSFQWFSANE EEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCC LNGIYTKIDNASNSTYTIPSDQQNLYFKVELTPLTMNDSKTPPVVVKKS CCEEEEEECCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECC >Mature Secondary Structure MIKKTLLAVTISTTLISGVAFAAEGNDTGVLTSATTAPSVGYRPVAVAGEEGLEVKGKLY CCCCEEEEEEEEHHHHCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE IGQTLRIDKLFYTDKDGDGIDNTTGKGESVLDKSEIKWFLISKNVNNPDLSGTPSHSGTQ ECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEE FEIPKNASQSVIWITYKVAASAGHPYQAFSTHKIKLTSKIKGLEGGTDGIITNRASNVSI EECCCCCCCEEEEEEEEEEECCCCCEECCCEEEEEEEEEECCCCCCCCCEEEECCCCEEE IINNPGDKNPSNELNGTDSINSPIVGATLSTKCSFKDDEKSNASNCDSEGYSFQWFSANE EEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCC LNGIYTKIDNASNSTYTIPSDQQNLYFKVELTPLTMNDSKTPPVVVKKS CCEEEEEECCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA