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The map label for this gene is ydcK [H]

Identifier: 218548862

GI number: 218548862

Start: 1542114

End: 1543094

Strand: Reverse

Name: ydcK [H]

Synonym: EFER_1507

Alternate gene names: 218548862

Gene position: 1543094-1542114 (Counterclockwise)

Preceding gene: 218548867

Following gene: 218548857

Centisome position: 33.63

GC content: 46.38

Gene sequence:

>981_bases
ATGCGCAAATATCGTCTAAGTGAGGAGCAACGTGCCTTTAGTTATCAGGTAGATGGCTGTAAAAAGAGTGTGTTATTACG
GCAGATTATCGCTCTTACTGACTTTAATGATGTGAAAACCGGAATGGCTGGTGGCTGGGTCGATGATGATACTGTACTGG
CGCAGGATGGTAACTGTTGGATTTATGACCAGAACGCAATAGCATTTGCCGGTACGATAATAAGTGGCAATGTTCGAATT
ACTGGTCACAGCGTACTTTATGACAACGTGAAGACCAGTGATAATGCATGGATCGATAATGCGGAAATCAGTCAAGGCGC
ACACATAAGTGACAATGTCACAATTAAAGATTCTCTCATTTGTGGTCAATGCCGAATTTATGGTCATGCCACGGTCGATC
AGCACTCAATGGTTATCGCCGCTCAGGGTTTAACACCCGATCTCCAGCTTCAACTGCAAATCTATGATCACGCCAGCGTG
AGCGCCTCACGTGTGGTTCATCAGGCGCAAATTTATGGTGACGCTACGGTACGTCATGCTTTTATTGAGCACCGCGCCGA
AGTTTTTGATTTTGCGTTAATCGCAGGCAATGAGGAGAATAACGTCTGGCTATGTGATTGTGCCAAAGTTTACGGGCATG
GGCGGGTAATCGCCGGACGTGAAGAAGATGCGATCCCGACTTTGCATTACAGCTCGCAAGTGGCAGAAAACGCAACGGTT
GTGGGGAATTGTGTATTAAAGCACCACGTGTTGATCGGCGGTAATGCACGGTTATACGGTGGCCCTATATTGCTTGACGA
ACATATTCTGATTCAGGGCAATGCCCGTCTTCAGGGAGAAGTGTTAATTGAGGATCATGTGGAAATTACAGACAACGCTG
TGATTGAAGCTATTGATGGCGATGCGATTCACCTGCGTGGTCCTAAAGTTATTAATGGGGAACAGAGGATCACTCGCACG
CCGTTAGCAGGATTACTTTAA

Upstream 100 bases:

>100_bases
CATAAGGTACATTAGAAATGCATTTTATGGGATTTTCTCTATCATCGCCAGAGACGCAAAATTTGCTACGTTTATAGTAA
GTCACCGGTGGGGAAACGCT

Downstream 100 bases:

>100_bases
AGACGGATCAATAATTCGCCCATAAATATTAATATCGTCATAACTGCCGTTAAGAAATTCAGCCTGTTTCAGACAGCCTT
CGTATGCAAATTCGTTGCGC

Product: transferase hexapeptide LpxA like enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRKYRLSEEQRAFSYQVDGCKKSVLLRQIIALTDFNDVKTGMAGGWVDDDTVLAQDGNCWIYDQNAIAFAGTIISGNVRI
TGHSVLYDNVKTSDNAWIDNAEISQGAHISDNVTIKDSLICGQCRIYGHATVDQHSMVIAAQGLTPDLQLQLQIYDHASV
SASRVVHQAQIYGDATVRHAFIEHRAEVFDFALIAGNEENNVWLCDCAKVYGHGRVIAGREEDAIPTLHYSSQVAENATV
VGNCVLKHHVLIGGNARLYGGPILLDEHILIQGNARLQGEVLIEDHVEITDNAVIEAIDGDAIHLRGPKVINGEQRITRT
PLAGLL

Sequences:

>Translated_326_residues
MRKYRLSEEQRAFSYQVDGCKKSVLLRQIIALTDFNDVKTGMAGGWVDDDTVLAQDGNCWIYDQNAIAFAGTIISGNVRI
TGHSVLYDNVKTSDNAWIDNAEISQGAHISDNVTIKDSLICGQCRIYGHATVDQHSMVIAAQGLTPDLQLQLQIYDHASV
SASRVVHQAQIYGDATVRHAFIEHRAEVFDFALIAGNEENNVWLCDCAKVYGHGRVIAGREEDAIPTLHYSSQVAENATV
VGNCVLKHHVLIGGNARLYGGPILLDEHILIQGNARLQGEVLIEDHVEITDNAVIEAIDGDAIHLRGPKVINGEQRITRT
PLAGLL
>Mature_326_residues
MRKYRLSEEQRAFSYQVDGCKKSVLLRQIIALTDFNDVKTGMAGGWVDDDTVLAQDGNCWIYDQNAIAFAGTIISGNVRI
TGHSVLYDNVKTSDNAWIDNAEISQGAHISDNVTIKDSLICGQCRIYGHATVDQHSMVIAAQGLTPDLQLQLQIYDHASV
SASRVVHQAQIYGDATVRHAFIEHRAEVFDFALIAGNEENNVWLCDCAKVYGHGRVIAGREEDAIPTLHYSSQVAENATV
VGNCVLKHHVLIGGNARLYGGPILLDEHILIQGNARLQGEVLIEDHVEITDNAVIEAIDGDAIHLRGPKVINGEQRITRT
PLAGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=77.6073619631902, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35699; Mature: 35699

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYRLSEEQRAFSYQVDGCKKSVLLRQIIALTDFNDVKTGMAGGWVDDDTVLAQDGNCW
CCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFAGTIISGNVRITGHSVLYDNVKTSDNAWIDNAEISQGAHISDNVTIKDSLI
EEECCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEE
CGQCRIYGHATVDQHSMVIAAQGLTPDLQLQLQIYDHASVSASRVVHQAQIYGDATVRHA
EEEEEEEEECEECCCEEEEEECCCCCCEEEEEEEECCCCCCHHHHHEEEHCCCCHHHHHH
FIEHRAEVFDFALIAGNEENNVWLCDCAKVYGHGRVIAGREEDAIPTLHYSSQVAENATV
HHHHHHHHEEEEEEECCCCCCEEEEEEHHHHCCCEEEECCCCCCCCEEECCHHHHCCCEE
VGNCVLKHHVLIGGNARLYGGPILLDEHILIQGNARLQGEVLIEDHVEITDNAVIEAIDG
EEEEEEEEEEEECCCEEEECCEEEEECEEEEECCCEEEEEEEEECCEEECCCEEEEEECC
DAIHLRGPKVINGEQRITRTPLAGLL
CEEEEECCEEECCCCCEEECCHHCCC
>Mature Secondary Structure
MRKYRLSEEQRAFSYQVDGCKKSVLLRQIIALTDFNDVKTGMAGGWVDDDTVLAQDGNCW
CCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFAGTIISGNVRITGHSVLYDNVKTSDNAWIDNAEISQGAHISDNVTIKDSLI
EEECCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEE
CGQCRIYGHATVDQHSMVIAAQGLTPDLQLQLQIYDHASVSASRVVHQAQIYGDATVRHA
EEEEEEEEECEECCCEEEEEECCCCCCEEEEEEEECCCCCCHHHHHEEEHCCCCHHHHHH
FIEHRAEVFDFALIAGNEENNVWLCDCAKVYGHGRVIAGREEDAIPTLHYSSQVAENATV
HHHHHHHHEEEEEEECCCCCCEEEEEEHHHHCCCEEEECCCCCCCCEEECCHHHHCCCEE
VGNCVLKHHVLIGGNARLYGGPILLDEHILIQGNARLQGEVLIEDHVEITDNAVIEAIDG
EEEEEEEEEEEECCCEEEECCEEEEECEEEEECCCEEEEEEEEECCEEECCCEEEEEECC
DAIHLRGPKVINGEQRITRTPLAGLL
CEEEEECCEEECCCCCEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]