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The map label for this gene is ydcE [H]

Identifier: 218548832

GI number: 218548832

Start: 1513016

End: 1513297

Strand: Direct

Name: ydcE [H]

Synonym: EFER_1475

Alternate gene names: 218548832

Gene position: 1513016-1513297 (Clockwise)

Preceding gene: 218548831

Following gene: 218548834

Centisome position: 32.97

GC content: 45.74

Gene sequence:

>282_bases
ATGCCAGTCGCAGACTGTGCTAGCTTTGCTAATACTTTCAAAAGGAGCAAAACAATGCCGCATATCGATATCAAATGTTT
TCCGCGTGAACTGGACTCTCAACAACAAGCAGCACTGGCAGCAGATATTACCGACGTCATCATTCGCCATTTGGGCAGTA
AAGAAAGCTCAGTGAGTGTTGCACTGCAACAAATTCCACCGGAATCGTGGAAGTCCATCTGGGACGCAGAAATTGCTCCT
CAGATGGATACCTTGATTAAGAAGCCTGGTTACAGTATGTGA

Upstream 100 bases:

>100_bases
CTGCACTGCTTGCTGATCGTATAGAAAACATTGAACGCGACGCATCAATTATTGATCTTGGTTTTCATCTTATTGAGCGC
GACTCCGCATAAACAAACAA

Downstream 100 bases:

>100_bases
AAAATTAGCCAGCGGTGACTCGCTTCCCGCTGGTAACAAACGTGCCAGCACCTAAGTGATGTAATGTATTGAGTTTATCG
TCATCAAACTGCCAGCGGCC

Product: 4-oxalocrotonate tautomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MPVADCASFANTFKRSKTMPHIDIKCFPRELDSQQQAALAADITDVIIRHLGSKESSVSVALQQIPPESWKSIWDAEIAP
QMDTLIKKPGYSM

Sequences:

>Translated_93_residues
MPVADCASFANTFKRSKTMPHIDIKCFPRELDSQQQAALAADITDVIIRHLGSKESSVSVALQQIPPESWKSIWDAEIAP
QMDTLIKKPGYSM
>Mature_92_residues
PVADCASFANTFKRSKTMPHIDIKCFPRELDSQQQAALAADITDVIIRHLGSKESSVSVALQQIPPESWKSIWDAEIAPQ
MDTLIKKPGYSM

Specific function: Unknown

COG id: COG1942

COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-oxalocrotonate tautomerase family. PptA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787734, Length=75, Percent_Identity=85.3333333333333, Blast_Score=138, Evalue=9e-35,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004370
- InterPro:   IPR014347
- InterPro:   IPR017284 [H]

Pfam domain/function: PF01361 Tautomerase [H]

EC number: 5.3.2.- [C]

Molecular weight: Translated: 10332; Mature: 10201

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVADCASFANTFKRSKTMPHIDIKCFPRELDSQQQAALAADITDVIIRHLGSKESSVSV
CCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALQQIPPESWKSIWDAEIAPQMDTLIKKPGYSM
HHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
PVADCASFANTFKRSKTMPHIDIKCFPRELDSQQQAALAADITDVIIRHLGSKESSVSV
CHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALQQIPPESWKSIWDAEIAPQMDTLIKKPGYSM
HHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA