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The map label for this gene is arnF [H]

Identifier: 218548291

GI number: 218548291

Start: 925983

End: 926651

Strand: Reverse

Name: arnF [H]

Synonym: EFER_0910

Alternate gene names: 218548291

Gene position: 926651-925983 (Counterclockwise)

Preceding gene: 218548292

Following gene: 218548281

Centisome position: 20.19

GC content: 51.87

Gene sequence:

>669_bases
TTGTCAGAAACAGGCGACCCGGCCAGTGGCGATAAACAAACGGCGCAAACATATCGCGCTGTGGCTGGGGCTGGGGCTGG
TCTGCCTTGGTCTGGCGATGGTGCTCTGGCTACTGGTATTACAGACCGTACCCGTAGGAATCGCCTACCCTATGCTAAGC
CTGAATTTTGTCTGGGTGACACTGGCGGCAACAAAACTCTGGCACGAACCGGTGTCTTTTCGGCACTGGTGTGGGGTGGC
GTTCATTATTGGTGGCATTGTGATTCTCGGGAGTACGGTGTAATGGGTCTGATGTGGGGATTATTCAGCGTCATTATTGC
CTCCGCTGCGCAATTAAGCCTGGGGTATGCGGCGAGTCATCTACCGCCGATGACGCAATTCTGGGATTTTATTGCGGCAT
TTTTTGCCTTTGGTCCCGGAGCCAGAATGCTGGTCGTCGGCCTGGTGGGTTATCTGCTCTCTGTTTTTTGCTGGTATAAA
GCGTTACACCAGTTAGCACTCAGCAAAGCCTATGCCTTACTCAGTATGAGTTATGTGCTGGTATGGATTGCATCTATGGT
ACTTCCCGGCTGGGAAGGAACTTTTTCGCTGAAGGCACTACTGGGAGTAGCCTGTATTATGAGTGGGTTGATGCTGATTT
TCCTGCCCACGACAAAACAACGTTACTGA

Upstream 100 bases:

>100_bases
GCCGTCGATCATCAAGGGCGTCTGGTATTAATTCAGTATTTACCAAAATGATTTGGCTGGTATTGATTCTCGCCAGTTTG
CTTAGTGTGACCGGGCAGCT

Downstream 100 bases:

>100_bases
GTTTTCCCAGCCGATTGACACTGCCGTTCCCACTCATCGGGGCTGTAGCTGCTTGCCGAGAGGACTTTCACCGTATGTAG
CTTTTCACGATTAATACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSETGDPASGDKQTAQTYRAVAGAGAGLPWSGDGALATGITDRTRRNRLPYAKPEFCLGDTGGNKTLARTGVFSALVWGG
VHYWWHCDSREYGVMGLMWGLFSVIIASAAQLSLGYAASHLPPMTQFWDFIAAFFAFGPGARMLVVGLVGYLLSVFCWYK
ALHQLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY

Sequences:

>Translated_222_residues
MSETGDPASGDKQTAQTYRAVAGAGAGLPWSGDGALATGITDRTRRNRLPYAKPEFCLGDTGGNKTLARTGVFSALVWGG
VHYWWHCDSREYGVMGLMWGLFSVIIASAAQLSLGYAASHLPPMTQFWDFIAAFFAFGPGARMLVVGLVGYLLSVFCWYK
ALHQLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
>Mature_221_residues
SETGDPASGDKQTAQTYRAVAGAGAGLPWSGDGALATGITDRTRRNRLPYAKPEFCLGDTGGNKTLARTGVFSALVWGGV
HYWWHCDSREYGVMGLMWGLFSVIIASAAQLSLGYAASHLPPMTQFWDFIAAFFAFGPGARMLVVGLVGYLLSVFCWYKA
LHQLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family [H]

Homologues:

Organism=Escherichia coli, GI87082075, Length=128, Percent_Identity=89.0625, Blast_Score=209, Evalue=9e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022832 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24041; Mature: 23910

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETGDPASGDKQTAQTYRAVAGAGAGLPWSGDGALATGITDRTRRNRLPYAKPEFCLGD
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCEECC
TGGNKTLARTGVFSALVWGGVHYWWHCDSREYGVMGLMWGLFSVIIASAAQLSLGYAASH
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPPMTQFWDFIAAFFAFGPGARMLVVGLVGYLLSVFCWYKALHQLALSKAYALLSMSYVL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure 
SETGDPASGDKQTAQTYRAVAGAGAGLPWSGDGALATGITDRTRRNRLPYAKPEFCLGD
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCEECC
TGGNKTLARTGVFSALVWGGVHYWWHCDSREYGVMGLMWGLFSVIIASAAQLSLGYAASH
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPPMTQFWDFIAAFFAFGPGARMLVVGLVGYLLSVFCWYKALHQLALSKAYALLSMSYVL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA