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The map label for this gene is yfhL

Identifier: 218547911

GI number: 218547911

Start: 511640

End: 511900

Strand: Reverse

Name: yfhL

Synonym: EFER_0513

Alternate gene names: 218547911

Gene position: 511900-511640 (Counterclockwise)

Preceding gene: 218547912

Following gene: 218547898

Centisome position: 11.16

GC content: 46.36

Gene sequence:

>261_bases
ATGGCGCTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGG
CGATCATATCTACGAGATTAACAGCGATAAGTGTACCGAGTGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGT
GCCCGATCCCTAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAGCAGTTGTGGGATAAATTTGTGCTGATG
CACCACGCGGATAAGATTTAA

Upstream 100 bases:

>100_bases
GAACGTATTCGTCATAGTGAAGCGCTGGTGAAAAAACTGGTTTGAGTAAAGAATGCGCGTATAATGCCCGCCCGGTTTGT
GTTGTTTTGAGAGTTTCCTT

Downstream 100 bases:

>100_bases
TATTTTGCTCTGGAAGTAGAGTATTAAATATTTTACAGGAAAGCCTTAACGCCATTATATTTATTTAATTGATGACATTA
GCATAATTATTCACCAAATG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLM
HHADKI

Sequences:

>Translated_86_residues
MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLM
HHADKI
>Mature_85_residues
ALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMH
HADKI

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1788914, Length=86, Percent_Identity=100, Blast_Score=178, Evalue=8e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFHL_ECOLI (P52102)

Other databases:

- EMBL:   U36841
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A65034
- RefSeq:   AP_003148.1
- RefSeq:   NP_417057.1
- PDB:   2ZVS
- PDBsum:   2ZVS
- ProteinModelPortal:   P52102
- SMR:   P52102
- STRING:   P52102
- EnsemblBacteria:   EBESCT00000003487
- EnsemblBacteria:   EBESCT00000016969
- GeneID:   947031
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2546
- KEGG:   eco:b2562
- EchoBASE:   EB3006
- EcoGene:   EG13215
- eggNOG:   COG1145
- GeneTree:   EBGT00050000011037
- HOGENOM:   HBG734156
- OMA:   PQCVEVC
- ProtClustDB:   CLSK880435
- BioCyc:   EcoCyc:G7346-MONOMER
- Genevestigator:   P52102
- InterPro:   IPR017896
- InterPro:   IPR017900

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9791; Mature: 9660

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTI
CCEEECCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCEECCCCCCC
VKDPAHVETEEQLWDKFVLMHHADKI
CCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTI
CEEECCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCEECCCCCCC
VKDPAHVETEEQLWDKFVLMHHADKI
CCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503