| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218532880
Identifier: 218532880
GI number: 218532880
Start: 5351073
End: 5351357
Strand: Reverse
Name: 218532880
Synonym: Mchl_5003
Alternate gene names: NA
Gene position: 5351357-5351073 (Counterclockwise)
Preceding gene: 218532881
Following gene: 218532878
Centisome position: 92.62
GC content: 71.93
Gene sequence:
>285_bases ATGTCTCGCTCCTTGCCCCGCCTCGCCTTTGCCCTGCTGCTCGCTGGCGGTGGTTCAGCCTGGGGTGCGGAGACCTTCCG GGTCGAAGGCCTGCCGCGGGACGACAGCCTGACGATCCGCGAGACGCCGGATGCGGGCGCACCGGCGCTCGGACAGATCC CGGTCGGGCGCCGGGTGCTCGGCTTCGGCTGCACCAACGAGACGCCGAGCGGGCTGACATGGTGCCGGGTGAAGTTCGAC CGCACCCTCGGCTGGGCGCGGCGGCGCTACCTGACGCCGGATTGA
Upstream 100 bases:
>100_bases TGATCGGGGAGGGCGGGGCCTACATCACCGGCGCGGTGCTGCCCGTCGATGGCGGCTTGACCGCGATGATGGGCATCCAC CGCACCTGAACCGGCCCGCG
Downstream 100 bases:
>100_bases GCCCCGCGCCGACGTCCCGGCCCACGAAGACCGACGCGGCGTCCCCGAACTGCGAGGGGTGACGGTCTCACTGCGCCGCT TGCAGCGTGTCGGCGAGGAA
Product: SH3 type 3 domain protein
Products: NA
Alternate protein names: SH3 Type 3 Domain Protein
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSRSLPRLAFALLLAGGGSAWGAETFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVLGFGCTNETPSGLTWCRVKFD RTLGWARRRYLTPD
Sequences:
>Translated_94_residues MSRSLPRLAFALLLAGGGSAWGAETFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVLGFGCTNETPSGLTWCRVKFD RTLGWARRRYLTPD >Mature_93_residues SRSLPRLAFALLLAGGGSAWGAETFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVLGFGCTNETPSGLTWCRVKFDR TLGWARRRYLTPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10232; Mature: 10101
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSLPRLAFALLLAGGGSAWGAETFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVL CCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE GFGCTNETPSGLTWCRVKFDRTLGWARRRYLTPD EECCCCCCCCCEEEEEEEECCCCCHHHCCCCCCC >Mature Secondary Structure SRSLPRLAFALLLAGGGSAWGAETFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVL CCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE GFGCTNETPSGLTWCRVKFDRTLGWARRRYLTPD EECCCCCCCCCEEEEEEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA