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The map label for this gene is nrtA [H]

Identifier: 218532837

GI number: 218532837

Start: 5295787

End: 5296803

Strand: Reverse

Name: nrtA [H]

Synonym: Mchl_4960

Alternate gene names: 218532837

Gene position: 5296803-5295787 (Counterclockwise)

Preceding gene: 218532838

Following gene: 218532836

Centisome position: 91.67

GC content: 74.14

Gene sequence:

>1017_bases
ATGAGGATCAGACTCGGATACGTCCCCCTCACCGACGCCGCCCCCGTGATCGCGGCGGCGGAACTGGGCTTCGCACGCGC
CGAGGGGCTCGAGATCGAACTCGCGCGCGAGCCCTCCTGGGCGACCCTGCGCGACCGGCTGGCGCTCGGCCATCTCGACG
CCGCGCACATGCTCGGGCCGCTCGCCATCGCCAGCGCGCTCGGGCTCTCGGGGCCGGAGGCCCGTCTGAGCGTGCCGATG
GCGCTCGGCCTCAACGGCAACGCCGTGACCGTCTCGAACGCGCTCTGGGCGGCGATGTCGCCGGAGAGCGACGGGCTGAG
TGACGTGGCTGCGGCTTTCTCGGCGGTCGCCCGCGCGCGGGCCGGGGAGGGGCGTCCGCTCGTCATCGGCACCGTGCATC
CCTTCTCCAGCCATTCCTACCAGCTCCGCCTGTTCGCCGGCCTGAGCGGGCTCGACCTCGACGCAACGGTGCGTCTGGTC
GTGGTGCCGCCGCCGGAGACGGTGGATGCGCTCCGGCGCGGTCGCATCGACGGTTTCTGCGTCGGCGCCCCCTGGAACAG
CGTCGCGGTCGCCGCCGGCCTCGGCCGGATCGCGGCACTCGGTTGCGAGATCGCGCCCGACTGCCCGGAGAAGGTGCTGG
CGCTGCCCGCGGAGGGGGCCGACTTCACGTCACCCTTGGTCAGGGCCGTCCACCGCGCCGGTCTTTGGTGCGCCGCCCCC
GAGAACCACGAGGCCCTGAGCCGCCTGCTCGCCGAACGGGCAGAACTCGACGCGGATGCCGCGCTTCTCGCGCGCACGCT
CAGTGGCGCGCTGATCGTGGATCGGGACGGAACCGAGCGGGCGAACCCGGACTATCTGCGCCTCGACGCGGCGACCCACC
GGCCGGACCCGGAGCATGCCCGGTGGCTGGTGGCGCAGATGGCCGCCTGCGGGCAGGTGGCGTCCGGCGACGACGCGGAG
GACCGGGCGGCGGCGCTCTACCGGCCCGACCTCTTCGCCGCGGCCATCGGCGGCTGA

Upstream 100 bases:

>100_bases
AGGACGAGGCCTACAAGCTCCTGCGGCGGCAGGCGATGAACGAGAAGCGCAAGATCGTCGACATCGCCCGCGCCATCGTC
ACCGCGGCGGATCTACTCGG

Downstream 100 bases:

>100_bases
TCACTTTTTCAGCGGCACGGGACCGGCCCGGGCTGCAAAGCGCAGCAGCAGCCCATTTTTTGTGCACCGCATGAAATCCT
GGGGCCGCTGAGCGCGGGCA

Product: nitrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MRIRLGYVPLTDAAPVIAAAELGFARAEGLEIELAREPSWATLRDRLALGHLDAAHMLGPLAIASALGLSGPEARLSVPM
ALGLNGNAVTVSNALWAAMSPESDGLSDVAAAFSAVARARAGEGRPLVIGTVHPFSSHSYQLRLFAGLSGLDLDATVRLV
VVPPPETVDALRRGRIDGFCVGAPWNSVAVAAGLGRIAALGCEIAPDCPEKVLALPAEGADFTSPLVRAVHRAGLWCAAP
ENHEALSRLLAERAELDADAALLARTLSGALIVDRDGTERANPDYLRLDAATHRPDPEHARWLVAQMAACGQVASGDDAE
DRAAALYRPDLFAAAIGG

Sequences:

>Translated_338_residues
MRIRLGYVPLTDAAPVIAAAELGFARAEGLEIELAREPSWATLRDRLALGHLDAAHMLGPLAIASALGLSGPEARLSVPM
ALGLNGNAVTVSNALWAAMSPESDGLSDVAAAFSAVARARAGEGRPLVIGTVHPFSSHSYQLRLFAGLSGLDLDATVRLV
VVPPPETVDALRRGRIDGFCVGAPWNSVAVAAGLGRIAALGCEIAPDCPEKVLALPAEGADFTSPLVRAVHRAGLWCAAP
ENHEALSRLLAERAELDADAALLARTLSGALIVDRDGTERANPDYLRLDAATHRPDPEHARWLVAQMAACGQVASGDDAE
DRAAALYRPDLFAAAIGG
>Mature_338_residues
MRIRLGYVPLTDAAPVIAAAELGFARAEGLEIELAREPSWATLRDRLALGHLDAAHMLGPLAIASALGLSGPEARLSVPM
ALGLNGNAVTVSNALWAAMSPESDGLSDVAAAFSAVARARAGEGRPLVIGTVHPFSSHSYQLRLFAGLSGLDLDATVRLV
VVPPPETVDALRRGRIDGFCVGAPWNSVAVAAGLGRIAALGCEIAPDCPEKVLALPAEGADFTSPLVRAVHRAGLWCAAP
ENHEALSRLLAERAELDADAALLARTLSGALIVDRDGTERANPDYLRLDAATHRPDPEHARWLVAQMAACGQVASGDDAE
DRAAALYRPDLFAAAIGG

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35163; Mature: 35163

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRLGYVPLTDAAPVIAAAELGFARAEGLEIELAREPSWATLRDRLALGHLDAAHMLGP
CEEEEECEECCCCCCHHHHHHHCHHHCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHH
LAIASALGLSGPEARLSVPMALGLNGNAVTVSNALWAAMSPESDGLSDVAAAFSAVARAR
HHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHH
AGEGRPLVIGTVHPFSSHSYQLRLFAGLSGLDLDATVRLVVVPPPETVDALRRGRIDGFC
CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCEEE
VGAPWNSVAVAAGLGRIAALGCEIAPDCPEKVLALPAEGADFTSPLVRAVHRAGLWCAAP
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCHHHHHHHHHHHCCEEEECC
ENHEALSRLLAERAELDADAALLARTLSGALIVDRDGTERANPDYLRLDAATHRPDPEHA
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHH
RWLVAQMAACGQVASGDDAEDRAAALYRPDLFAAAIGG
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHEECCC
>Mature Secondary Structure
MRIRLGYVPLTDAAPVIAAAELGFARAEGLEIELAREPSWATLRDRLALGHLDAAHMLGP
CEEEEECEECCCCCCHHHHHHHCHHHCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHH
LAIASALGLSGPEARLSVPMALGLNGNAVTVSNALWAAMSPESDGLSDVAAAFSAVARAR
HHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHH
AGEGRPLVIGTVHPFSSHSYQLRLFAGLSGLDLDATVRLVVVPPPETVDALRRGRIDGFC
CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCEEE
VGAPWNSVAVAAGLGRIAALGCEIAPDCPEKVLALPAEGADFTSPLVRAVHRAGLWCAAP
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCHHHHHHHHHHHCCEEEECC
ENHEALSRLLAERAELDADAALLARTLSGALIVDRDGTERANPDYLRLDAATHRPDPEHA
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHH
RWLVAQMAACGQVASGDDAEDRAAALYRPDLFAAAIGG
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437564 [H]