Definition | Methylobacterium chloromethanicum CM4, complete genome. |
---|---|
Accession | NC_011757 |
Length | 5,777,908 |
Click here to switch to the map view.
The map label for this gene is 218532828
Identifier: 218532828
GI number: 218532828
Start: 5285230
End: 5286150
Strand: Reverse
Name: 218532828
Synonym: Mchl_4951
Alternate gene names: NA
Gene position: 5286150-5285230 (Counterclockwise)
Preceding gene: 218532829
Following gene: 218532826
Centisome position: 91.49
GC content: 71.66
Gene sequence:
>921_bases ATGAACGGGCACGCCGCGGCCTCTCCCTGGCACCGGGGCGAGGTGGCGATCCAAGAGAGTGTCGGCATGGCCGGCCGGAT GGCCGAGCTCGGTCCGCGGGTGATCCGCGATCACCTGACCGATCAGCACCGGGCGTTCTTTCCGCTCCTGCCCTTCGCCG TCCTCGGAAGCGTGGATGGGGAGGGCCGCCCCTGGGCGACGTTGCGGGAGGGCGAACCGGGATTCCTGCACGCGCCGGAC CCGTTTCGGCTCCGGGTGGACGGGCGCCGCGAGCCGGACGATCCCGCCGAGGCGGGGCTGGAGGACGGCGACGGCGTGGC CCTGCTCGGCATCGAACTGGCCACGCGCCGCCGCAACCGCTTGAACGGAACCGTCGAGTGCGCGGGGCCGGAGGGCTTCG CGATCCACGTCGAGCAGAGTTTCGGGAATTGCCCGCAATACATCCACAGCCGGCATGAAGGCCCCCGCATCGGAGACGGG GCGACCCGGCCCCGCCCCGTCCTGTCGGACGAGCTCGATCCGGCGGCGCGGGCTCTCGTCGCGGCGGCCGACACCTTCTT CGTCGCGAGCTTCGTCGAGGATGCGGGGGGCCGGCGGCAGGTCGATGTCTCGCACCGGGGAGGGCGGCCCGGCTTCGTGC GGGTCGGCGCGGAGGGCAGCCTCACGGTGCCCGACTATTCCGGCAACCGCTTCTTCAACACGCTGGGCAATCTGCTGGCG AATCCGCGCGCCGGGCTGGTCTTTCCGGATTTCGCGACCGGCGATCTGCTGCAGATGAGCGGGCGCACCGAAATCGTGCT CGATCCGAACGAGGACGAACGGATCGACGGCGCCGAGCGCCTGTGGCGGTTCGTGCCGGAGCGGGTCGTGTTCCGGCCTC GCGCGCTAGGGCTGCGCTTCGTCGAGCATCGGGCGGCGTAG
Upstream 100 bases:
>100_bases ACGAAAACGTCCGCGCCTGGCTCGCCCGCATCGAGGCGCTGCCCGGCTTCGTGTCACTCCCGGCCTCGCCGGTCGGCCTG AACGCGACGGGAGCCTCCGC
Downstream 100 bases:
>100_bases CGAAGCCTCAGTCGGATTTCCGGCTGCAGCGGATGTAGTTCGCCTGGCCCTTGCCGCTCGTCCAGGTGAGCCGGTCATGC TCGACGAGGAGGCGGACCTG
Product: pyridoxamine 5'-phosphate oxidase-related FMN-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNGHAAASPWHRGEVAIQESVGMAGRMAELGPRVIRDHLTDQHRAFFPLLPFAVLGSVDGEGRPWATLREGEPGFLHAPD PFRLRVDGRREPDDPAEAGLEDGDGVALLGIELATRRRNRLNGTVECAGPEGFAIHVEQSFGNCPQYIHSRHEGPRIGDG ATRPRPVLSDELDPAARALVAAADTFFVASFVEDAGGRRQVDVSHRGGRPGFVRVGAEGSLTVPDYSGNRFFNTLGNLLA NPRAGLVFPDFATGDLLQMSGRTEIVLDPNEDERIDGAERLWRFVPERVVFRPRALGLRFVEHRAA
Sequences:
>Translated_306_residues MNGHAAASPWHRGEVAIQESVGMAGRMAELGPRVIRDHLTDQHRAFFPLLPFAVLGSVDGEGRPWATLREGEPGFLHAPD PFRLRVDGRREPDDPAEAGLEDGDGVALLGIELATRRRNRLNGTVECAGPEGFAIHVEQSFGNCPQYIHSRHEGPRIGDG ATRPRPVLSDELDPAARALVAAADTFFVASFVEDAGGRRQVDVSHRGGRPGFVRVGAEGSLTVPDYSGNRFFNTLGNLLA NPRAGLVFPDFATGDLLQMSGRTEIVLDPNEDERIDGAERLWRFVPERVVFRPRALGLRFVEHRAA >Mature_306_residues MNGHAAASPWHRGEVAIQESVGMAGRMAELGPRVIRDHLTDQHRAFFPLLPFAVLGSVDGEGRPWATLREGEPGFLHAPD PFRLRVDGRREPDDPAEAGLEDGDGVALLGIELATRRRNRLNGTVECAGPEGFAIHVEQSFGNCPQYIHSRHEGPRIGDG ATRPRPVLSDELDPAARALVAAADTFFVASFVEDAGGRRQVDVSHRGGRPGFVRVGAEGSLTVPDYSGNRFFNTLGNLLA NPRAGLVFPDFATGDLLQMSGRTEIVLDPNEDERIDGAERLWRFVPERVVFRPRALGLRFVEHRAA
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33402; Mature: 33402
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHAAASPWHRGEVAIQESVGMAGRMAELGPRVIRDHLTDQHRAFFPLLPFAVLGSVDG CCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC EGRPWATLREGEPGFLHAPDPFRLRVDGRREPDDPAEAGLEDGDGVALLGIELATRRRNR CCCCCEEEECCCCCEEECCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHH LNGTVECAGPEGFAIHVEQSFGNCPQYIHSRHEGPRIGDGATRPRPVLSDELDPAARALV CCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AAADTFFVASFVEDAGGRRQVDVSHRGGRPGFVRVGAEGSLTVPDYSGNRFFNTLGNLLA HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHC NPRAGLVFPDFATGDLLQMSGRTEIVLDPNEDERIDGAERLWRFVPERVVFRPRALGLRF CCCCCEEECCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHH VEHRAA HHHCCC >Mature Secondary Structure MNGHAAASPWHRGEVAIQESVGMAGRMAELGPRVIRDHLTDQHRAFFPLLPFAVLGSVDG CCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC EGRPWATLREGEPGFLHAPDPFRLRVDGRREPDDPAEAGLEDGDGVALLGIELATRRRNR CCCCCEEEECCCCCEEECCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHH LNGTVECAGPEGFAIHVEQSFGNCPQYIHSRHEGPRIGDGATRPRPVLSDELDPAARALV CCCEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AAADTFFVASFVEDAGGRRQVDVSHRGGRPGFVRVGAEGSLTVPDYSGNRFFNTLGNLLA HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHC NPRAGLVFPDFATGDLLQMSGRTEIVLDPNEDERIDGAERLWRFVPERVVFRPRALGLRF CCCCCEEECCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHH VEHRAA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA