| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is thiE [H]
Identifier: 218532812
GI number: 218532812
Start: 5269479
End: 5270204
Strand: Reverse
Name: thiE [H]
Synonym: Mchl_4935
Alternate gene names: 218532812
Gene position: 5270204-5269479 (Counterclockwise)
Preceding gene: 218532814
Following gene: 218532811
Centisome position: 91.21
GC content: 73.14
Gene sequence:
>726_bases ATGGGCAGCGGAACAGGGCTCGGTTTGTCCCGGCCGTCGGCGGGCGTCGCCGTGGACCTGCGCCTCTACGGCATCCTCGA TGTCGGCGTGCTGGGGGGCGATGCCACCGCGCTTGCCACCCTGGCGGCGGAGGCGGTGGCCGGGGGTGCCACCCTGCTCC AGTACCGCGACAAGGATCTGACCGACGCCCGCGCGGCCCTCGCACGGATCCGGGCGATCCATGCGGCCCTCGCCGGTCGC GCGCCGCTCCTCGTCAACGACCGGGTCGATCTCGCGCTGGCTGCCGGCGTCGAGGGCGTGCATCTCGGCCAGTCGGATCT CCACCCCGAAGACGCGCGCCGCCTGCTCGGCCCGCGCGCCATCATCGGGCTCACCGTGAAGACCGGCGCCCAGGCCGACG AACTCTACCGGCTGCCCATCGACTACGCCTGCATCGGCGGCGTGTTCGCCACCACCAGCAAGGACAACCCCGACCCGCCG GTCGGGCTCGACGGGTTGCAGCGGATCGTGTTCCGCGCCCGGCTCGCCCGCGGCCAGTCCCTGCCGCTCGGCGCGATCGC CGGGATCGACGCCAGCAACACTGCCTCCGTCATCCGGGCCGGTGCCGACGGGGTGGCTCTGATCGGCGCCCTGTTCAAGG GCGGTGCCACCGAGGCCAAGGCGCGGGATCTGCTTGCACGGGTCGATGAGGCGCTGGGCCAGCGTGGGAGCACGGGCACG CGTTAA
Upstream 100 bases:
>100_bases AATCGCCCGAACGCGATTGCCCTTGTTCTTTGTTGGCCTCAGTCGCCGCGGCAGGCCGATCCTGCTAGATCGAAAGGCGA ATTCATCGAAGGGAGCGGGT
Downstream 100 bases:
>100_bases GGCCGGAAGAAGCGGACCATCAAAAAAATAGACGAGGGAAGACGCCCATGACCGCCATCGCCCTGACCATCGCCGGCTCG GATTCGAGCGGGGGCGCCGG
Product: thiamine-phosphate diphosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MGSGTGLGLSRPSAGVAVDLRLYGILDVGVLGGDATALATLAAEAVAGGATLLQYRDKDLTDARAALARIRAIHAALAGR APLLVNDRVDLALAAGVEGVHLGQSDLHPEDARRLLGPRAIIGLTVKTGAQADELYRLPIDYACIGGVFATTSKDNPDPP VGLDGLQRIVFRARLARGQSLPLGAIAGIDASNTASVIRAGADGVALIGALFKGGATEAKARDLLARVDEALGQRGSTGT R
Sequences:
>Translated_241_residues MGSGTGLGLSRPSAGVAVDLRLYGILDVGVLGGDATALATLAAEAVAGGATLLQYRDKDLTDARAALARIRAIHAALAGR APLLVNDRVDLALAAGVEGVHLGQSDLHPEDARRLLGPRAIIGLTVKTGAQADELYRLPIDYACIGGVFATTSKDNPDPP VGLDGLQRIVFRARLARGQSLPLGAIAGIDASNTASVIRAGADGVALIGALFKGGATEAKARDLLARVDEALGQRGSTGT R >Mature_240_residues GSGTGLGLSRPSAGVAVDLRLYGILDVGVLGGDATALATLAAEAVAGGATLLQYRDKDLTDARAALARIRAIHAALAGRA PLLVNDRVDLALAAGVEGVHLGQSDLHPEDARRLLGPRAIIGLTVKTGAQADELYRLPIDYACIGGVFATTSKDNPDPPV GLDGLQRIVFRARLARGQSLPLGAIAGIDASNTASVIRAGADGVALIGALFKGGATEAKARDLLARVDEALGQRGSTGTR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325042, Length=171, Percent_Identity=31.5789473684211, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 24454; Mature: 24323
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGTGLGLSRPSAGVAVDLRLYGILDVGVLGGDATALATLAAEAVAGGATLLQYRDKDL CCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCHHEEEECCCCH TDARAALARIRAIHAALAGRAPLLVNDRVDLALAAGVEGVHLGQSDLHPEDARRLLGPRA HHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCEECCCCCCCHHHHHHHHCCCE IIGLTVKTGAQADELYRLPIDYACIGGVFATTSKDNPDPPVGLDGLQRIVFRARLARGQS EEEEEEECCCCHHHEEECCCCHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC LPLGAIAGIDASNTASVIRAGADGVALIGALFKGGATEAKARDLLARVDEALGQRGSTGT CCCHHEECCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC R C >Mature Secondary Structure GSGTGLGLSRPSAGVAVDLRLYGILDVGVLGGDATALATLAAEAVAGGATLLQYRDKDL CCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCHHEEEECCCCH TDARAALARIRAIHAALAGRAPLLVNDRVDLALAAGVEGVHLGQSDLHPEDARRLLGPRA HHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCEECCCCCCCHHHHHHHHCCCE IIGLTVKTGAQADELYRLPIDYACIGGVFATTSKDNPDPPVGLDGLQRIVFRARLARGQS EEEEEEECCCCHHHEEECCCCHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC LPLGAIAGIDASNTASVIRAGADGVALIGALFKGGATEAKARDLLARVDEALGQRGSTGT CCCHHEECCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]