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The map label for this gene is hslR [H]

Identifier: 218532733

GI number: 218532733

Start: 5166901

End: 5167176

Strand: Reverse

Name: hslR [H]

Synonym: Mchl_4856

Alternate gene names: 218532733

Gene position: 5167176-5166901 (Counterclockwise)

Preceding gene: 218532734

Following gene: 218532732

Centisome position: 89.43

GC content: 72.83

Gene sequence:

>276_bases
ATGAGCGCGGGGCGCCAGCGCCTCGACAAATGGCTATGGTTCGCGCGCTTTGCGCGGACCCGCTCGATGGCGGCCCGGCT
GGTGAGCGACGGGCATGTCCGCGTGAACGGCACCCGTACCGACGCGCCGGCCAAGGCCATCCATTGCGGTGACGTGCTCA
CCGTCGCCGCCCCCCACGGCACGATGCTGGTGCGAGTGCTCGATCTCGGCGAGCGCCGCGGCGGCGCCCCGGAGGCGCAG
CGGCTCTACGAACCGGTCGGCGAGGCCAGCTCCTGA

Upstream 100 bases:

>100_bases
GAATCGGACGGGGGCAAGCGCTGACGCGTCCGCGCGACAAGCGGTTGCCGGCTTTTCGGAGAGCGGGCGCCGTGACGGCT
CCGGCAATCGTGATCACCGG

Downstream 100 bases:

>100_bases
CGTCTCATTCGGCGCGATCCGCCCTGCCGGCAAACCTGCCGCTTGATCATCGTCGCACAAGCCTCTAATCGGTCCGCGCC
TTTACGCCCGGCTTACGGCC

Product: RNA-binding S4 domain protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSAGRQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLVRVLDLGERRGGAPEAQ
RLYEPVGEASS

Sequences:

>Translated_91_residues
MSAGRQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLVRVLDLGERRGGAPEAQ
RLYEPVGEASS
>Mature_90_residues
SAGRQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHGTMLVRVLDLGERRGGAPEAQR
LYEPVGEASS

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=83, Percent_Identity=39.7590361445783, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 9927; Mature: 9796

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGRQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEECCCEEEEECCCC
TMLVRVLDLGERRGGAPEAQRLYEPVGEASS
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAGRQRLDKWLWFARFARTRSMAARLVSDGHVRVNGTRTDAPAKAIHCGDVLTVAAPHG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEECCCEEEEECCCC
TMLVRVLDLGERRGGAPEAQRLYEPVGEASS
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]