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The map label for this gene is yvsH [H]

Identifier: 218236039

GI number: 218236039

Start: 654587

End: 655984

Strand: Reverse

Name: yvsH [H]

Synonym: BCB4264_A0665

Alternate gene names: 218236039

Gene position: 655984-654587 (Counterclockwise)

Preceding gene: 218233010

Following gene: 218233854

Centisome position: 12.11

GC content: 35.77

Gene sequence:

>1398_bases
ATGGAAACGAAAAAATGGGGATTATGGGTTTTAACAGCATTTGTTATCGGGAATATGGTTGGCGGTGGCGTATTTATGCT
TCCAGCAAATTTAGCACAAGTATCAGGGCCAATGGGTTCTACACTCGCATGGAGTATTACAGGCCTTGGCGTATTTATGA
TTGCACTTGTATTTGGAAATTTAGCGATTCGGAAACCAGAATTAAAAGCTGGACCACAAAGCTATGCTCAAGCGATGTTT
CCTTCAAAAAAAGCTGGTAAAGTTGCAGGATATAGTATGGCATGGGGATATTGGGCTGCTAACTGGGCTGCAACAGCATC
TGTTATTATTTCCTTTGCTGGATATTTATCAACATTCTTTCCAGTTTTACAAAGTAAGCAAATTCTTTTTTCAATAAATG
GATTTTCACTGGAACTCGGAAAAGGATTAACTTTCCTCGTATGTAGCCTTATGCTGTGGGGAATTCAATATATTCTTTCT
CAAAATATTGATCGAGCTGGAAACATGAATCTACTTGCTACCATTGCAAAAATTATCGGATTTACAATGTTTATTGTAAT
TACATTATTCATTTTCAACGCCTCTAATTTCGGAGACGGTCAAACCTTTATGAATGAAGCAGGACAATCAATCTCATTAG
GTGGACAAATCAATTCAGCTGCTATTGCAACACTCTGGGCATTTATCGGTATTGAATCAGCAGTTATGCTTTCTAATCGT
GCAAAATCACAGCGCGATGTAAAAAAAGCTACGATTTTCGGATTAATTATCGCTCTTCTTATTTACATGTCAATTACTTT
ACTTACAATGGGAGCTCTTCCGCAAGATGCTTTAAAAGAGTCTCAAAAACCATTAGTAGACGCATTAAATTTAGCAATTG
GAAATAAAGGTGCATATATAATGGCTTTACTCGCTCTTATATCTTTATTTGGATCTACAGTTGGCTGGATTGTTGTTAGT
TCAGAAGTACCTTACCAGGCAGCAAAAAATGGACTTTTCCCTAAGTTTTTCGGGAAAACAAATAAAAAAGGTAGTCCTTC
AAAATCACTATTGATTACAAATGTAATGACGCAAATTTTCTTATTTTCAACGATTTCTGGTACTGTTTCAGAAGCGTATA
GTTTCGCTATCGTCGTAGCAACATTAGCCTATTTAATTCCATACCTTGTTTCTACCTTGTACCAATTAAAATTAGTTATT
ACAGGAGAAACGTATGATATACTGCCAGGATCTCGAGTAAAAGATGGAATCATTACGACATTAGCGTTAATATACTCCAT
TTGGGTTATCAAAACGGGAACTGCTGATTTAAAAACATTCTTCTTAGGAATTGGATTGTTCGTATTAGGTCTTATTCTTT
ATCCAGTACTAATGAAAGACTCACAAAAAACGGATTAA

Upstream 100 bases:

>100_bases
CATGTAGGTATTTTTTTATCTACATGGCTCTTTTTTTATTGTCAAAAAGCTAGTAAAAAATGATGTTTAAGCAAAACTTA
CTACAAAGGAGTTAACAAAA

Downstream 100 bases:

>100_bases
ATAAAGAGAAGCTGCTGGCTTCTCTTTTTTATTAAAAATCTGTAATTAACTTTTCTTTTAGCTCTCCTACAGATAAAGGT
TTCGCATAATAAAATCCCTG

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALISLFGSTVGWIVVS
SEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQLKLVI
TGETYDILPGSRVKDGIITTLALIYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD

Sequences:

>Translated_465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALISLFGSTVGWIVVS
SEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQLKLVI
TGETYDILPGSRVKDGIITTLALIYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD
>Mature_465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALISLFGSTVGWIVVS
SEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQLKLVI
TGETYDILPGSRVKDGIITTLALIYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=457, Percent_Identity=30.4157549234136, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI2367353, Length=443, Percent_Identity=30.4740406320542, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1790575, Length=402, Percent_Identity=25.8706467661692, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI87082250, Length=365, Percent_Identity=26.8493150684932, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1786908, Length=438, Percent_Identity=24.4292237442922, Blast_Score=90, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71995388, Length=483, Percent_Identity=23.8095238095238, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71995382, Length=483, Percent_Identity=23.8095238095238, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50071; Mature: 50071

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
LAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFF
HHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIG
HHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCHHH
MALLALISLFGSTVGWIVVSSEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNVMTQIF
HHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
LFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQLKLVITGETYDILPGSRVKDGIITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHH
LALIYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
LAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFF
HHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIG
HHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCHHH
MALLALISLFGSTVGWIVVSSEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNVMTQIF
HHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
LFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQLKLVITGETYDILPGSRVKDGIITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHH
LALIYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]