Click here to switch to the map view.

The map label for this gene is vanW [H]

Identifier: 218234704

GI number: 218234704

Start: 2878021

End: 2878851

Strand: Reverse

Name: vanW [H]

Synonym: BCB4264_A3002

Alternate gene names: 218234704

Gene position: 2878851-2878021 (Counterclockwise)

Preceding gene: 218232770

Following gene: 218230864

Centisome position: 53.12

GC content: 36.22

Gene sequence:

>831_bases
ATGAATATAGTGCACTTACGTCCTAAACAGCGGTCTAAGTATCGCATTATGCTAGGTAAGTGGTATTACTCTACAAAGAG
GCACATTCAGTGGTTAGCAGACGGGAAAACATATGCAAAAAGGTTCCAACAAGAAAAGCTACCTTGTACAGCAATTCAGC
ACCAAACAATATTACTTCGTAAGCTCAAAGATGTAGATATGTGGTATCAACAGAATAAGGTTGTTAATTTGAAAATTGCT
GTTAAAAAACTAAATGGTATCGTCATTAGACCGGGAGAAACATTTTCTTACTGGCGTTTAATAGGTAAGCCAACGAGGAA
AAAAGGGTATGTAGAAGGTATGGTATTACACTACGGATCTTTTCAATCAGGTATTGGAGGAGGTCTTTGTCAGCTTTCAA
ATTTAATATATTGGATGACTCTACATACAACACTGACAGTAACCGAACGATATCGTCATAGCTTTGATGTCTTTCCTGAT
TCTAGGCGAACTCAACCGTTTGGGAGTGGGGCAACTTGTTCCTATAACTATTTGGATTTACAAATTAAAAATGAAACGGA
TCAACCGTATCAACTTCACCTTTATATGACAGATGAACATTTAGTTGGTGAATGGAGAACAGTCTATCCGCAACTTTATC
AATATGAAGTGTATGAGAAAGAACACTCAATTCAACCTGCATACTGGGGCGGTTATATACGACATAATGTGATTCAACGT
AAAGTATATAATCTACAGAAACAGTTAATAGAAGATCAATATGTAACAGAGAATCACGCTATAATGATGTACGAACCACT
ATTAGCTTGTAATAATGAGATTAGTGAGTAA

Upstream 100 bases:

>100_bases
TATTATTTTTTTGCGAAAATTATTATGCAGTTAAGAAAACTGTAATTTATTGAATTAGAAATATATTAGAATTTAGTTGA
AGAAAGAGAGAGGGAATAAA

Downstream 100 bases:

>100_bases
TATGGTAACCCATAGATTAAGTAGTATAGAAAATATTTAATTCTTATTTTTACTAAAAAAGTTCACTGTTATTTATAGGT
GAGTTTGTTTTTCTATCTTA

Product: vancomycin B-type resistance protein VanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNIVHLRPKQRSKYRIMLGKWYYSTKRHIQWLADGKTYAKRFQQEKLPCTAIQHQTILLRKLKDVDMWYQQNKVVNLKIA
VKKLNGIVIRPGETFSYWRLIGKPTRKKGYVEGMVLHYGSFQSGIGGGLCQLSNLIYWMTLHTTLTVTERYRHSFDVFPD
SRRTQPFGSGATCSYNYLDLQIKNETDQPYQLHLYMTDEHLVGEWRTVYPQLYQYEVYEKEHSIQPAYWGGYIRHNVIQR
KVYNLQKQLIEDQYVTENHAIMMYEPLLACNNEISE

Sequences:

>Translated_276_residues
MNIVHLRPKQRSKYRIMLGKWYYSTKRHIQWLADGKTYAKRFQQEKLPCTAIQHQTILLRKLKDVDMWYQQNKVVNLKIA
VKKLNGIVIRPGETFSYWRLIGKPTRKKGYVEGMVLHYGSFQSGIGGGLCQLSNLIYWMTLHTTLTVTERYRHSFDVFPD
SRRTQPFGSGATCSYNYLDLQIKNETDQPYQLHLYMTDEHLVGEWRTVYPQLYQYEVYEKEHSIQPAYWGGYIRHNVIQR
KVYNLQKQLIEDQYVTENHAIMMYEPLLACNNEISE
>Mature_276_residues
MNIVHLRPKQRSKYRIMLGKWYYSTKRHIQWLADGKTYAKRFQQEKLPCTAIQHQTILLRKLKDVDMWYQQNKVVNLKIA
VKKLNGIVIRPGETFSYWRLIGKPTRKKGYVEGMVLHYGSFQSGIGGGLCQLSNLIYWMTLHTTLTVTERYRHSFDVFPD
SRRTQPFGSGATCSYNYLDLQIKNETDQPYQLHLYMTDEHLVGEWRTVYPQLYQYEVYEKEHSIQPAYWGGYIRHNVIQR
KVYNLQKQLIEDQYVTENHAIMMYEPLLACNNEISE

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007391 [H]

Pfam domain/function: PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 32862; Mature: 32862

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVHLRPKQRSKYRIMLGKWYYSTKRHIQWLADGKTYAKRFQQEKLPCTAIQHQTILLR
CCEEECCCCCCCCEEEEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHH
KLKDVDMWYQQNKVVNLKIAVKKLNGIVIRPGETFSYWRLIGKPTRKKGYVEGMVLHYGS
HHHHHHHHHHCCCEEEEEEEEEEECCEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEECC
FQSGIGGGLCQLSNLIYWMTLHTTLTVTERYRHSFDVFPDSRRTQPFGSGATCSYNYLDL
CCCCCCCCHHHHHHEEEEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
QIKNETDQPYQLHLYMTDEHLVGEWRTVYPQLYQYEVYEKEHSIQPAYWGGYIRHNVIQR
EEECCCCCCEEEEEEEECCHHHCCHHHHHHHHHHEEEEHHHCCCCCCCCCHHHHHHHHHH
KVYNLQKQLIEDQYVTENHAIMMYEPLLACNNEISE
HHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCC
>Mature Secondary Structure
MNIVHLRPKQRSKYRIMLGKWYYSTKRHIQWLADGKTYAKRFQQEKLPCTAIQHQTILLR
CCEEECCCCCCCCEEEEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHH
KLKDVDMWYQQNKVVNLKIAVKKLNGIVIRPGETFSYWRLIGKPTRKKGYVEGMVLHYGS
HHHHHHHHHHCCCEEEEEEEEEEECCEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEECC
FQSGIGGGLCQLSNLIYWMTLHTTLTVTERYRHSFDVFPDSRRTQPFGSGATCSYNYLDL
CCCCCCCCHHHHHHEEEEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
QIKNETDQPYQLHLYMTDEHLVGEWRTVYPQLYQYEVYEKEHSIQPAYWGGYIRHNVIQR
EEECCCCCCEEEEEEEECCHHHCCHHHHHHHHHHEEEEHHHCCCCCCCCCHHHHHHHHHH
KVYNLQKQLIEDQYVTENHAIMMYEPLLACNNEISE
HHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631706; 12663927 [H]