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The map label for this gene is yfiY [H]

Identifier: 218234576

GI number: 218234576

Start: 639638

End: 640606

Strand: Reverse

Name: yfiY [H]

Synonym: BCB4264_A0652

Alternate gene names: 218234576

Gene position: 640606-639638 (Counterclockwise)

Preceding gene: 218234050

Following gene: 218234132

Centisome position: 11.82

GC content: 33.44

Gene sequence:

>969_bases
ATGAATTTCATGCGGAAGAAATCGTTTACAGTATTTGTATTTTTACTAGCATTTTCAATGCTTTTAAGCGCTTGTGGAAA
ATCAAATAATAAAGAAGAATCTACAAAAGAAGATAATAAAAAAGAAGTGGTTACTGTAGAACATGCAATGGGTAAAACAG
AAGTTCCTGCTAATCCAAAACGTGTAGTTATCTTAACAAATGAAGGAACTGAAGCTTTACTTGAGTTAGGTGTGAAACCA
GTTGGTGCTGTAAAGTCTTGGACTGGTGACCCATGGTATCCACATATTAAGGATAAAATGAAAGATGTAAAAGTTGTTGG
TGATGAAGGACAAGTTAACGTTGAAACAATTGCTTCTTTAAAACCAGACTTAATTATCGGTAATAAAATGCGCCACGAAA
AAGTGTACGAACAACTAAAAGCAATTGCACCTACTGTGTTCTCAGATACATTACGTGGTGAATGGAAAGATAACTTCAAA
TTTTATGCAAAAGCATTAAATAAAGAAAAAGAAGGTCAAAAAGTTGTAGCTGATTACGAATCACGTATAAAAGATTTAAA
AGGCAAACTTGGCGATAAAGTAAACCAAGAAATCTCTATGGTTCGTTTCATGCCTGGTGATGTTCGTATTTATCATGGCG
ATACATTCTCTGGTGTTATTTTAAAAGAACTTGGATTTAAACGTCCTGGAGATCAAAATAAAGATGATTTTGCAGAGCGT
AACGTATCTAAAGAGCGTATTTCTGCTATGGATGGTGACGTATTATTCTACTTCACATTCGATAAAGGAAATGAGAAAAA
AGGATCTGAACTAGAAAAAGAGTATATAAACGATCCTCTATTTAAAAATTTAAATGCAGTAAAAAATGGTAAAGCATACA
AAGTTGATGACGTTATTTGGAATACAGCTGGTGGCGTAATGGCCGCTAACCTACTATTAGATGACATCGAAAAACGCTTT
GTTAAATAA

Upstream 100 bases:

>100_bases
ATGAGAATTATTTTCACCCATATGTATTGACAATCAAAAGATAAAGGCTTAATATCATGCTTGCTATTGAAAAATATTCT
CAACATGTAGGGGGTACATA

Downstream 100 bases:

>100_bases
TATTTCCTTAACCAGCTCCCTTCTGTGGAGCTGGTTATTTTTCAATTCACTTAAATGTCACATTATTTCGTTTTGTATTT
TTATTCCCAATATGTTATAT

Product: iron compound ABC transporter, iron compound-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNFMRKKSFTVFVFLLAFSMLLSACGKSNNKEESTKEDNKKEVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKP
VGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSDTLRGEWKDNFK
FYAKALNKEKEGQKVVADYESRIKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAER
NVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVMAANLLLDDIEKRF
VK

Sequences:

>Translated_322_residues
MNFMRKKSFTVFVFLLAFSMLLSACGKSNNKEESTKEDNKKEVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKP
VGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSDTLRGEWKDNFK
FYAKALNKEKEGQKVVADYESRIKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAER
NVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVMAANLLLDDIEKRF
VK
>Mature_322_residues
MNFMRKKSFTVFVFLLAFSMLLSACGKSNNKEESTKEDNKKEVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKP
VGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSDTLRGEWKDNFK
FYAKALNKEKEGQKVVADYESRIKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAER
NVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVMAANLLLDDIEKRF
VK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=281, Percent_Identity=24.9110320284698, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36403; Mature: 36403

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFMRKKSFTVFVFLLAFSMLLSACGKSNNKEESTKEDNKKEVVTVEHAMGKTEVPANPK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEHHHCCCCCCCCCCC
RVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASL
EEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCCCEEHHHHHHC
KPDLIIGNKMRHEKVYEQLKAIAPTVFSDTLRGEWKDNFKFYAKALNKEKEGQKVVADYE
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
SRIKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAER
HHHHHHHHHHCHHHHHHHHHHEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHH
NVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIW
CCCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHH
NTAGGVMAANLLLDDIEKRFVK
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFMRKKSFTVFVFLLAFSMLLSACGKSNNKEESTKEDNKKEVVTVEHAMGKTEVPANPK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCEEEEEHHHCCCCCCCCCCC
RVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASL
EEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCCCCEEHHHHHHC
KPDLIIGNKMRHEKVYEQLKAIAPTVFSDTLRGEWKDNFKFYAKALNKEKEGQKVVADYE
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
SRIKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAER
HHHHHHHHHHCHHHHHHHHHHEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHH
NVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIW
CCCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEHHHHH
NTAGGVMAANLLLDDIEKRFVK
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]