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The map label for this gene is yobV [H]

Identifier: 218231818

GI number: 218231818

Start: 674615

End: 675568

Strand: Reverse

Name: yobV [H]

Synonym: BCB4264_A0684

Alternate gene names: 218231818

Gene position: 675568-674615 (Counterclockwise)

Preceding gene: 218233945

Following gene: 218234703

Centisome position: 12.47

GC content: 34.7

Gene sequence:

>954_bases
TTGTCAAAAGCTAAACGCTTATTAGATATTCTTATATTTGCTTCTGCCAAAAAGACATTTACAGCGCAAGAAATAGCTGA
TGAATTTAATATCTCCGTTCGTACTGTCCATAGATACATTTTAGATTTAAGTGATATGGGGTTGCCCATTTACGCAGAAC
AAGGTCGTAACGGCGGCTATAAAGTATTAACGAATAGAGTAATTCCGCCTATTTTATTTACGGAAGAAGAAGCAGTCTCT
ATCTTTTTTGCTTTTCAATCTTTAAGTTACTATCGCGACTTACCTTTTAACACAGAAATCAATTCCGTTACACATAAACT
GTATAGCTCCCTACAACATGATGCAAAAACGAAAGTTGATAAAATACGTTCTTACATCGCTTTTTGGAATCCGAAGCGCA
CAATTGATACACCTCTTTTAAACGAAGTGTTAACCGCGGCTATTGAAAATAAAAATTTACACTTTCAATACGAATCTAAA
TCGGGGTTAAAAACAAAACACGTTCATCCTATCGGTGTATATGCTCATGACGGGCTATGGTATTTACCGTCCTATGACTT
CAGTAGAAAAAAAGTATTACTGTATCGCGTTGATCGTATTCTTTCTATATTATCAACAGAAGAAAGTGAAAGTACGTTCA
TGAATTTAGAAGAATGGTTTGACTCTAGCTCTAACGTCATAAACATTCCTATCCAGTTACATGTTTTATTAACGACAGAA
GGTGTGCGCCAATGTAAAAGCGTGCCTTACCTTGAAGAATTCGTTGTAGTAAATGAGGACGGGACAGGATATATACATTC
AACAATTGATAAAGGTGAAATTAATTTTATTACCCCTTTATTTTATAGGCTTGGAAAAGATGTACAAGTGTTAGAACCGA
AAGAATTAATAGATGGTTTACGTATACGTGCGAAAGAAATTTTACATATGTATGAAGACGAAAAAAGCTGCTAG

Upstream 100 bases:

>100_bases
TCCTCCTTGCATCTCACCTTGATAACATATGATGTAAACAATATACTAACAATAAAACATGACAATTTATGTCATGTTAA
AAAGAAAAAAGGTGATACAT

Downstream 100 bases:

>100_bases
ATGTAAGCAGCTTTTTAGTCTCTTTGTTACTATTGACGAATATCAATCCACCAACGATATGATGCATTCATATTTTCAGT
ACTTCCATTCCCTCTGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSKAKRLLDILIFASAKKTFTAQEIADEFNISVRTVHRYILDLSDMGLPIYAEQGRNGGYKVLTNRVIPPILFTEEEAVS
IFFAFQSLSYYRDLPFNTEINSVTHKLYSSLQHDAKTKVDKIRSYIAFWNPKRTIDTPLLNEVLTAAIENKNLHFQYESK
SGLKTKHVHPIGVYAHDGLWYLPSYDFSRKKVLLYRVDRILSILSTEESESTFMNLEEWFDSSSNVINIPIQLHVLLTTE
GVRQCKSVPYLEEFVVVNEDGTGYIHSTIDKGEINFITPLFYRLGKDVQVLEPKELIDGLRIRAKEILHMYEDEKSC

Sequences:

>Translated_317_residues
MSKAKRLLDILIFASAKKTFTAQEIADEFNISVRTVHRYILDLSDMGLPIYAEQGRNGGYKVLTNRVIPPILFTEEEAVS
IFFAFQSLSYYRDLPFNTEINSVTHKLYSSLQHDAKTKVDKIRSYIAFWNPKRTIDTPLLNEVLTAAIENKNLHFQYESK
SGLKTKHVHPIGVYAHDGLWYLPSYDFSRKKVLLYRVDRILSILSTEESESTFMNLEEWFDSSSNVINIPIQLHVLLTTE
GVRQCKSVPYLEEFVVVNEDGTGYIHSTIDKGEINFITPLFYRLGKDVQVLEPKELIDGLRIRAKEILHMYEDEKSC
>Mature_316_residues
SKAKRLLDILIFASAKKTFTAQEIADEFNISVRTVHRYILDLSDMGLPIYAEQGRNGGYKVLTNRVIPPILFTEEEAVSI
FFAFQSLSYYRDLPFNTEINSVTHKLYSSLQHDAKTKVDKIRSYIAFWNPKRTIDTPLLNEVLTAAIENKNLHFQYESKS
GLKTKHVHPIGVYAHDGLWYLPSYDFSRKKVLLYRVDRILSILSTEESESTFMNLEEWFDSSSNVINIPIQLHVLLTTEG
VRQCKSVPYLEEFVVVNEDGTGYIHSTIDKGEINFITPLFYRLGKDVQVLEPKELIDGLRIRAKEILHMYEDEKSC

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36599; Mature: 36468

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAKRLLDILIFASAKKTFTAQEIADEFNISVRTVHRYILDLSDMGLPIYAEQGRNGGY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCCE
KVLTNRVIPPILFTEEEAVSIFFAFQSLSYYRDLPFNTEINSVTHKLYSSLQHDAKTKVD
EEEECCCCCCEEECCHHHHEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KIRSYIAFWNPKRTIDTPLLNEVLTAAIENKNLHFQYESKSGLKTKHVHPIGVYAHDGLW
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEEEECCEE
YLPSYDFSRKKVLLYRVDRILSILSTEESESTFMNLEEWFDSSSNVINIPIQLHVLLTTE
ECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECH
GVRQCKSVPYLEEFVVVNEDGTGYIHSTIDKGEINFITPLFYRLGKDVQVLEPKELIDGL
HHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCEEECHHHHHCCCCCEEECHHHHHHHH
RIRAKEILHMYEDEKSC
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKAKRLLDILIFASAKKTFTAQEIADEFNISVRTVHRYILDLSDMGLPIYAEQGRNGGY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCCE
KVLTNRVIPPILFTEEEAVSIFFAFQSLSYYRDLPFNTEINSVTHKLYSSLQHDAKTKVD
EEEECCCCCCEEECCHHHHEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KIRSYIAFWNPKRTIDTPLLNEVLTAAIENKNLHFQYESKSGLKTKHVHPIGVYAHDGLW
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEEEECCEE
YLPSYDFSRKKVLLYRVDRILSILSTEESESTFMNLEEWFDSSSNVINIPIQLHVLLTTE
ECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECH
GVRQCKSVPYLEEFVVVNEDGTGYIHSTIDKGEINFITPLFYRLGKDVQVLEPKELIDGL
HHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCEEECHHHHHCCCCCEEECHHHHHHHH
RIRAKEILHMYEDEKSC
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]