Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 218231066

GI number: 218231066

Start: 706663

End: 707604

Strand: Reverse

Name: mcp4 [H]

Synonym: BCB4264_A0715

Alternate gene names: 218231066

Gene position: 707604-706663 (Counterclockwise)

Preceding gene: 218233391

Following gene: 218235559

Centisome position: 13.06

GC content: 32.48

Gene sequence:

>942_bases
ATGTTTACTCAAAAAAAATCACTCCAACATACAATTGCTCAATTAGAAGAGCGTATACAAGAATTAGAATTAGAATTAAA
ACAAAAAGATATTGAAAAGCAAGAGACTATTTCTACTATCCACGATCGTGTACAAAGCGTTGTCCAAGAGCATCAACTTG
TAAATAACCAACACAATACACTTCAAAATTTAGTTCAACAATTAAGTTCATGTTTCGAAAATGTTTCAACACGTACGACA
CATTCCAATGAGTTAAATAATGAAATGTTACAAAAGGAACAAAGCTTAATTCAGTCTATTGCAGAAATTATTGACTGCTC
TAATGAAGGAAAAGAATCCGTTCACCGTTTACTTATTGTAATTAATAAATTAGGTGAACAATCTCAACGCACGTCTAATA
GTATGAATCATCTAAGCGAACGCTCAAAGGAAATCGAGCAAATTGTAGAAGTCATTCAAAACATTGCAGCACAAACAAAT
TTACTTGCATTAAATGCGAGTATTGAAGCCGCACGTGCTGGGGAGCACGGTAAAGGATTCGCTGTCGTTGCCAATGAGGT
AAGAAAGCTAGCGGAAAGTACAGCAGAAAGTACAAAAAACATCGGCAACTTAACCAAAAAAATTCAAGAAGAAATTGAAA
AAGCATATGATAACACAAAAGATAATTTACATTTAGTCGATGAAGGTGTAGAAATGAGCGCCGATACAAATGCTAGAATT
GAAAATATTTTAGTTATGATTCAAACGTTACAAAATGGTGCTACAAATGTTATTAAGGCTATCGAAAACCAAAAGTCTTG
TAATGATGACATATTACGAGAATTTGCTAACACACAACAAATGTTCCAAAAATTAAATACTACTATTATGAATCATATTC
ATGATGCTGAAAAAGTCGATGTTCAATTGTCTAAAAGTCTTCAAGAAACAGTAACTTCTTAA

Upstream 100 bases:

>100_bases
TTCTTAAATATTTAACAATTCCTATATTTAAAAAATACAAAAGATGCTAAAATCCAAATATAGAGAAAATATAACTTTCG
AAGGCGGTTGAAATAAATAC

Downstream 100 bases:

>100_bases
TTAAAAATAAAAATCCCTTATACTGCTATAAGGGATTTTTATTTTATTTTGAATATTTATTTCTTTTCAATATTCATCCA
TATCTTTGTTATAATGGAAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MFTQKKSLQHTIAQLEERIQELELELKQKDIEKQETISTIHDRVQSVVQEHQLVNNQHNTLQNLVQQLSSCFENVSTRTT
HSNELNNEMLQKEQSLIQSIAEIIDCSNEGKESVHRLLIVINKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTN
LLALNASIEAARAGEHGKGFAVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
ENILVMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVDVQLSKSLQETVTS

Sequences:

>Translated_313_residues
MFTQKKSLQHTIAQLEERIQELELELKQKDIEKQETISTIHDRVQSVVQEHQLVNNQHNTLQNLVQQLSSCFENVSTRTT
HSNELNNEMLQKEQSLIQSIAEIIDCSNEGKESVHRLLIVINKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTN
LLALNASIEAARAGEHGKGFAVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
ENILVMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVDVQLSKSLQETVTS
>Mature_313_residues
MFTQKKSLQHTIAQLEERIQELELELKQKDIEKQETISTIHDRVQSVVQEHQLVNNQHNTLQNLVQQLSSCFENVSTRTT
HSNELNNEMLQKEQSLIQSIAEIIDCSNEGKESVHRLLIVINKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTN
LLALNASIEAARAGEHGKGFAVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
ENILVMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVDVQLSKSLQETVTS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=71, Percent_Identity=56.3380281690141, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1788194, Length=96, Percent_Identity=45.8333333333333, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787690, Length=71, Percent_Identity=57.7464788732394, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI2367378, Length=71, Percent_Identity=54.9295774647887, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789453, Length=80, Percent_Identity=48.75, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 35357; Mature: 35357

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTQKKSLQHTIAQLEERIQELELELKQKDIEKQETISTIHDRVQSVVQEHQLVNNQHNT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LQNLVQQLSSCFENVSTRTTHSNELNNEMLQKEQSLIQSIAEIIDCSNEGKESVHRLLIV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
INKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTNLLALNASIEAARAGEHGKGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCH
AVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHH
ENILVMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVD
HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLSKSLQETVTS
HHHHHHHHHHHCC
>Mature Secondary Structure
MFTQKKSLQHTIAQLEERIQELELELKQKDIEKQETISTIHDRVQSVVQEHQLVNNQHNT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LQNLVQQLSSCFENVSTRTTHSNELNNEMLQKEQSLIQSIAEIIDCSNEGKESVHRLLIV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
INKLGEQSQRTSNSMNHLSERSKEIEQIVEVIQNIAAQTNLLALNASIEAARAGEHGKGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCH
AVVANEVRKLAESTAESTKNIGNLTKKIQEEIEKAYDNTKDNLHLVDEGVEMSADTNARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHH
ENILVMIQTLQNGATNVIKAIENQKSCNDDILREFANTQQMFQKLNTTIMNHIHDAEKVD
HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLSKSLQETVTS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]