Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is yba4
Identifier: 21672822
GI number: 21672822
Start: 619131
End: 619469
Strand: Reverse
Name: yba4
Synonym: BUsg564
Alternate gene names: NA
Gene position: 619469-619131 (Counterclockwise)
Preceding gene: 21672824
Following gene: 21672816
Centisome position: 96.57
GC content: 20.94
Gene sequence:
>339_bases ATGTCATCTAATGTTACTCTAGTTGATAAATTAAATCCAATACGTCATAAAGAATTAAAAGTTAAAATTGATGAAATATG CCATAAATCACTAAAAAATCTTAAAAATACTTCAAAAATTTTAATAGAAGAAAAAAAACATCCTATTAGCAGTACTAAAG TTTCTATTAATTATATTGAAAACGAAAACGAAAATAAAAACAATTTAATTAATTTAGAAAATTTTTATAAAAAATATTTA TTAAAATTTAATGATTTTATAATGAAAAAAAAACTTTTTCTGAATCCTCTTCTGAGTCCTCTGCTGAAAGTACTTCCTAC AATCCACTCGATATATTAG
Upstream 100 bases:
>100_bases ATAATCCAATTTTTTATTTTTAAAAAATTTAATTTACATTTTCAAAAAAATATTCAATAAAACTAAATAAAATAGTAAAT TAAAAAAAGGAAAAAAAATT
Downstream 100 bases:
>100_bases AACGAATTCAAGAAAAAATTGAAACAACAATTAAAGATATTAATTTAAAAAAAAAAATAATAGAATCTTTTAATACAATA AAAGATAGCATACTCAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: yba4
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSSNVTLVDKLNPIRHKELKVKIDEICHKSLKNLKNTSKILIEEKKHPISSTKVSINYIENENENKNNLINLENFYKKYL LKFNDFIMKKKLFLNPLLSPLLKVLPTIHSIY
Sequences:
>Translated_112_residues MSSNVTLVDKLNPIRHKELKVKIDEICHKSLKNLKNTSKILIEEKKHPISSTKVSINYIENENENKNNLINLENFYKKYL LKFNDFIMKKKLFLNPLLSPLLKVLPTIHSIY >Mature_111_residues SSNVTLVDKLNPIRHKELKVKIDEICHKSLKNLKNTSKILIEEKKHPISSTKVSINYIENENENKNNLINLENFYKKYLL KFNDFIMKKKLFLNPLLSPLLKVLPTIHSIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Buchnera BU585
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y564_BUCAP (Q8K905)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660889.1 - EnsemblBacteria: EBBUCT00000000080 - GeneID: 1005627 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg564 - BioCyc: BAPH198804:BUSG564-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13192; Mature: 13061
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNVTLVDKLNPIRHKELKVKIDEICHKSLKNLKNTSKILIEEKKHPISSTKVSINYIE CCCCCEEHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEC NENENKNNLINLENFYKKYLLKFNDFIMKKKLFLNPLLSPLLKVLPTIHSIY CCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSNVTLVDKLNPIRHKELKVKIDEICHKSLKNLKNTSKILIEEKKHPISSTKVSINYIE CCCCEEHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEC NENENKNNLINLENFYKKYLLKFNDFIMKKKLFLNPLLSPLLKVLPTIHSIY CCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438