Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
---|---|
Accession | NC_004061 |
Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is mtlA
Identifier: 21672812
GI number: 21672812
Start: 606458
End: 608407
Strand: Reverse
Name: mtlA
Synonym: BUsg552
Alternate gene names: 21672812
Gene position: 608407-606458 (Counterclockwise)
Preceding gene: 21672813
Following gene: 21672811
Centisome position: 94.85
GC content: 24.87
Gene sequence:
>1950_bases ATGTTTAGATTAATAACATTAAAAATACAAAATTTTGGTCAATTTTTAAGTAATATGATTATGCCTAATATAAGTATATT TATTACGTGGGGCATCATGAACTCTTTGTTTCTTTCTTTAGATTGGCAATATAATAAAATATTTGCTCAATTAATATCAC CTATAATATTTTATCTTTTGCCTATTCTTATTGGATATACTGGAGGAAGTTTAATTGCTGGTCAAAGAGGAGGTTTATTA GGAAGTATAACTACTATAGGAATGATAACAAGTACAGATATGCCTATGTTTTTAGGAGGAATGGTTGCTGGTCCATTAGG AGGATGGATAATAAAAGGTTTTGATCAAATAATTAAAAACAGAATTAAAAGTGGTTTTGAAATGTTAGTTAATAATTTTT CAATTGCAATAATTGGAATATTTTTAACAATTTTTTCATTTTTTTTTATTGGTCCCTTCATTGAGGGGGTATCTAAATTT TTAGGATGTCTAATAAAAATAATAATAGATTTTAATTTGTTACCCCTTATTGCATTTATTATTGAACCAGCTAAGGTATT TTTTTTAAATAATGCAATTAATCATGGTATATTTTCTCCATTAGGAATTCAAGAAATATCAGAGAATAAAAGTTCTTTAT TTTTTTTAATAGAATCAAATCCTGGTCCAGGATTAGGCATATTAATAGCTTGCTTTTTTTTCGGAAAAGAAAAATCGTAT AAATCTTCAGGAACAGCTGCAATTGTTCAATTTTTAGGAGGAATTCATGAAATTTATTTTAGTTATGTATTGATAAAACC AATATTAATGATTTCTTTAATTTTAGGAAGTATGACAAGTATTTTTATGCTGGTTTTTTTTAAGGGAGGTTTAATTGCTG CTGTATCACCAGGTTCTATTTTATCTATTTTGGCGATGACAAAAAAAGGTTTATATTTTGCAAATTTAATTTCTATATTT TCTTCTTTTTTAATTTCTTTTTTGAGTGCAATGTTGTTTTTCAAAATTAATTTAGGTCAAAAAATAAAAAATGATAAAAG TTCTATACAATTATTTAAAAATAACTTATTTCCTATAAAGAAAATAGGTGATGAAAAATATGATTTTATTAAAAAAATTA AAAATTTTCAAAAAATTAAGAACATTATAATTGCTTGTGATGCTGGTATGGGATCTAGTGCTATGGGCGCAAGTATTCTG CGCAAAAAAATAAAAAGTAATAATTTAACACATATTTATGTATCTAATATTGCCATTAATTTGCTACCTAAAAATGCAGA TTTAGTTATTACACATGAAAAATTAACTTACCTTGCTAAAAAACGCGCTCCTGATGCTCAACATATATCATTAACAAATT TTCTTGATAGTAATTTTTATACCAGCTTAGTAAAACAATTAGACTTAAATAAAGATTTTTTTAAAAAAAATAATATTCAG GATAAAAAAGATCGTATTACTCAAATAAATATTGATTCTCATAAAGAAATTCAATCAAAGTGTTTTTTTCAAATAAGTGA TAAGAATATTTTTCTTAATCAATATGCTGAAAACAAAAAAGAAGCTATCAAAATTGTTGGTAAACATTTGGTAGCACAAG GATATGTTAAAAAAGATTATATTGATGCAATGCTTGATCGAGAAAAAATTGCTTCAACTTGGTTAGGCGAATCTGTAGCT TTACCTCATGGTACTATAAAATCTAAAGATTCTATTTTAAAAACTGGAGTAATTTTTTGCCAATTTCCTAAAGGTGTTCA TTTTGGAGAAACAATCGATGATATTGCTTATCTTGTTATTGGTATCGCTGCAAAGAATAATGAACATATTATGGTAGTTA GCAATATTACTAATGCATTAGATGATAAAGATGTTATTAGTAAATTATCAAAAACAAAAAGTGTAAAAGAAGTTTTATCA TATTTAAATGTAAATGTTAAAAAAAACTAA
Upstream 100 bases:
>100_bases TATAAAGTATTTTAAAAAATTTTTAACTTAAATAAGCTTTTTTTATCTATAGAATTAAAAATGTTTTTTACTGCTATTTT TCAAGTTTGAGTGAATATTT
Downstream 100 bases:
>100_bases TTTAAATTGGAATAATTTTATGAGAGCTTTACATTTTGGAGCAGGAAATATTGGACGAGGTTTTATCGCACGAGTATTAT TAAAATCTGATTTTAATTTG
Product: PTS system mannitol-specific IIABC component
Products: NA
Alternate protein names: EIICBA-Mtl; EII-Mtl; Mannitol permease IIC component; PTS system mannitol-specific EIIC component; Mannitol-specific phosphotransferase enzyme IIB component; PTS system mannitol-specific EIIB component; Mannitol-specific phosphotransferase enzyme IIA component; PTS system, mannitol-specific EIIA component
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MFRLITLKIQNFGQFLSNMIMPNISIFITWGIMNSLFLSLDWQYNKIFAQLISPIIFYLLPILIGYTGGSLIAGQRGGLL GSITTIGMITSTDMPMFLGGMVAGPLGGWIIKGFDQIIKNRIKSGFEMLVNNFSIAIIGIFLTIFSFFFIGPFIEGVSKF LGCLIKIIIDFNLLPLIAFIIEPAKVFFLNNAINHGIFSPLGIQEISENKSSLFFLIESNPGPGLGILIACFFFGKEKSY KSSGTAAIVQFLGGIHEIYFSYVLIKPILMISLILGSMTSIFMLVFFKGGLIAAVSPGSILSILAMTKKGLYFANLISIF SSFLISFLSAMLFFKINLGQKIKNDKSSIQLFKNNLFPIKKIGDEKYDFIKKIKNFQKIKNIIIACDAGMGSSAMGASIL RKKIKSNNLTHIYVSNIAINLLPKNADLVITHEKLTYLAKKRAPDAQHISLTNFLDSNFYTSLVKQLDLNKDFFKKNNIQ DKKDRITQINIDSHKEIQSKCFFQISDKNIFLNQYAENKKEAIKIVGKHLVAQGYVKKDYIDAMLDREKIASTWLGESVA LPHGTIKSKDSILKTGVIFCQFPKGVHFGETIDDIAYLVIGIAAKNNEHIMVVSNITNALDDKDVISKLSKTKSVKEVLS YLNVNVKKN
Sequences:
>Translated_649_residues MFRLITLKIQNFGQFLSNMIMPNISIFITWGIMNSLFLSLDWQYNKIFAQLISPIIFYLLPILIGYTGGSLIAGQRGGLL GSITTIGMITSTDMPMFLGGMVAGPLGGWIIKGFDQIIKNRIKSGFEMLVNNFSIAIIGIFLTIFSFFFIGPFIEGVSKF LGCLIKIIIDFNLLPLIAFIIEPAKVFFLNNAINHGIFSPLGIQEISENKSSLFFLIESNPGPGLGILIACFFFGKEKSY KSSGTAAIVQFLGGIHEIYFSYVLIKPILMISLILGSMTSIFMLVFFKGGLIAAVSPGSILSILAMTKKGLYFANLISIF SSFLISFLSAMLFFKINLGQKIKNDKSSIQLFKNNLFPIKKIGDEKYDFIKKIKNFQKIKNIIIACDAGMGSSAMGASIL RKKIKSNNLTHIYVSNIAINLLPKNADLVITHEKLTYLAKKRAPDAQHISLTNFLDSNFYTSLVKQLDLNKDFFKKNNIQ DKKDRITQINIDSHKEIQSKCFFQISDKNIFLNQYAENKKEAIKIVGKHLVAQGYVKKDYIDAMLDREKIASTWLGESVA LPHGTIKSKDSILKTGVIFCQFPKGVHFGETIDDIAYLVIGIAAKNNEHIMVVSNITNALDDKDVISKLSKTKSVKEVLS YLNVNVKKN >Mature_649_residues MFRLITLKIQNFGQFLSNMIMPNISIFITWGIMNSLFLSLDWQYNKIFAQLISPIIFYLLPILIGYTGGSLIAGQRGGLL GSITTIGMITSTDMPMFLGGMVAGPLGGWIIKGFDQIIKNRIKSGFEMLVNNFSIAIIGIFLTIFSFFFIGPFIEGVSKF LGCLIKIIIDFNLLPLIAFIIEPAKVFFLNNAINHGIFSPLGIQEISENKSSLFFLIESNPGPGLGILIACFFFGKEKSY KSSGTAAIVQFLGGIHEIYFSYVLIKPILMISLILGSMTSIFMLVFFKGGLIAAVSPGSILSILAMTKKGLYFANLISIF SSFLISFLSAMLFFKINLGQKIKNDKSSIQLFKNNLFPIKKIGDEKYDFIKKIKNFQKIKNIIIACDAGMGSSAMGASIL RKKIKSNNLTHIYVSNIAINLLPKNADLVITHEKLTYLAKKRAPDAQHISLTNFLDSNFYTSLVKQLDLNKDFFKKNNIQ DKKDRITQINIDSHKEIQSKCFFQISDKNIFLNQYAENKKEAIKIVGKHLVAQGYVKKDYIDAMLDREKIASTWLGESVA LPHGTIKSKDSILKTGVIFCQFPKGVHFGETIDDIAYLVIGIAAKNNEHIMVVSNITNALDDKDVISKLSKTKSVKEVLS YLNVNVKKN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2213
COG function: function code G; Phosphotransferase system, mannitol-specific IIBC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain
Homologues:
Organism=Escherichia coli, GI1790027, Length=640, Percent_Identity=52.34375, Blast_Score=673, Evalue=0.0, Organism=Escherichia coli, GI1789301, Length=460, Percent_Identity=42.6086956521739, Blast_Score=374, Evalue=1e-105, Organism=Escherichia coli, GI1788494, Length=141, Percent_Identity=39.7163120567376, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PTM3C_BUCAP (Q8K911)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660879.1 - ProteinModelPortal: Q8K911 - EnsemblBacteria: EBBUCT00000000069 - GeneID: 1005638 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg552 - GeneTree: EBGT00050000008060 - HOGENOM: HBG296680 - OMA: GMIMPNI - ProtClustDB: CLSK2459983 - BioCyc: BAPH198804:BUSG552-MONOMER - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - Gene3D: G3DSA:3.40.930.10
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB; SSF55804 PTrfase/Anion_transptr
EC number: =2.7.1.69
Molecular weight: Translated: 72359; Mature: 72359
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS51094 PTS_EIIA_TYPE_2; PS00372 PTS_EIIA_TYPE_2_HIS; PS51099 PTS_EIIB_TYPE_2; PS51104 PTS_EIIC_TYPE_2
Important sites: ACT_SITE 386-386 ACT_SITE 563-563
Signals:
None
Transmembrane regions:
HASH(0xcaa55f4)-; HASH(0xc7f4d64)-; HASH(0xad178c4)-; HASH(0xc2bf5d0)-; HASH(0xcc56604)-; HASH(0xc57a95c)-; HASH(0xcb4549c)-; HASH(0xc5f4200)-; HASH(0xca5fdec)-; HASH(0xc6055ec)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLITLKIQNFGQFLSNMIMPNISIFITWGIMNSLFLSLDWQYNKIFAQLISPIIFYLL CEEEEEEEHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHEECCHHHHHHHHHHHHHHHHHH PILIGYTGGSLIAGQRGGLLGSITTIGMITSTDMPMFLGGMVAGPLGGWIIKGFDQIIKN HHHHHCCCCCEEECCCCCCEEHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHH RIKSGFEMLVNNFSIAIIGIFLTIFSFFFIGPFIEGVSKFLGCLIKIIIDFNLLPLIAFI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IEPAKVFFLNNAINHGIFSPLGIQEISENKSSLFFLIESNPGPGLGILIACFFFGKEKSY HCCHHHEEEHHHHHCCCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC KSSGTAAIVQFLGGIHEIYFSYVLIKPILMISLILGSMTSIFMLVFFKGGLIAAVSPGSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH LSILAMTKKGLYFANLISIFSSFLISFLSAMLFFKINLGQKIKNDKSSIQLFKNNLFPIK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHH KIGDEKYDFIKKIKNFQKIKNIIIACDAGMGSSAMGASILRKKIKSNNLTHIYVSNIAIN HCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECEEEE LLPKNADLVITHEKLTYLAKKRAPDAQHISLTNFLDSNFYTSLVKQLDLNKDFFKKNNIQ EECCCCCEEEEHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC DKKDRITQINIDSHKEIQSKCFFQISDKNIFLNQYAENKKEAIKIVGKHLVAQGYVKKDY CCCCCEEEECCCCHHHHHHHHEEEECCCEEEEHHHHCCHHHHHHHHHHHHHHHCCHHHHH IDAMLDREKIASTWLGESVALPHGTIKSKDSILKTGVIFCQFPKGVHFGETIDDIAYLVI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCCCCCHHHHHHHHHH GIAAKNNEHIMVVSNITNALDDKDVISKLSKTKSVKEVLSYLNVNVKKN HEEECCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure MFRLITLKIQNFGQFLSNMIMPNISIFITWGIMNSLFLSLDWQYNKIFAQLISPIIFYLL CEEEEEEEHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHEECCHHHHHHHHHHHHHHHHHH PILIGYTGGSLIAGQRGGLLGSITTIGMITSTDMPMFLGGMVAGPLGGWIIKGFDQIIKN HHHHHCCCCCEEECCCCCCEEHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHH RIKSGFEMLVNNFSIAIIGIFLTIFSFFFIGPFIEGVSKFLGCLIKIIIDFNLLPLIAFI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IEPAKVFFLNNAINHGIFSPLGIQEISENKSSLFFLIESNPGPGLGILIACFFFGKEKSY HCCHHHEEEHHHHHCCCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC KSSGTAAIVQFLGGIHEIYFSYVLIKPILMISLILGSMTSIFMLVFFKGGLIAAVSPGSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH LSILAMTKKGLYFANLISIFSSFLISFLSAMLFFKINLGQKIKNDKSSIQLFKNNLFPIK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHH KIGDEKYDFIKKIKNFQKIKNIIIACDAGMGSSAMGASILRKKIKSNNLTHIYVSNIAIN HCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECEEEE LLPKNADLVITHEKLTYLAKKRAPDAQHISLTNFLDSNFYTSLVKQLDLNKDFFKKNNIQ EECCCCCEEEEHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC DKKDRITQINIDSHKEIQSKCFFQISDKNIFLNQYAENKKEAIKIVGKHLVAQGYVKKDY CCCCCEEEECCCCHHHHHHHHEEEECCCEEEEHHHHCCHHHHHHHHHHHHHHHCCHHHHH IDAMLDREKIASTWLGESVALPHGTIKSKDSILKTGVIFCQFPKGVHFGETIDDIAYLVI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCCCCCHHHHHHHHHH GIAAKNNEHIMVVSNITNALDDKDVISKLSKTKSVKEVLSYLNVNVKKN HEEECCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12089438