| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is flgE
Identifier: 21672604
GI number: 21672604
Start: 373509
End: 374738
Strand: Direct
Name: flgE
Synonym: BUsg328
Alternate gene names: 21672604
Gene position: 373509-374738 (Clockwise)
Preceding gene: 21672603
Following gene: 161485722
Centisome position: 58.23
GC content: 24.23
Gene sequence:
>1230_bases ATGTCAATCATAGAAACTATCAATGGATTAATGATTAATAATGATTATATAGACATTGTCTCAAATAATATAGCTAATGC TTCTACTATTGGATTTAAATCTAGTACTCCTTCATTTTTTGACATAGTTTCTCATTCATTCTATTCTAATCAAATAATAA AATCTGGAGTTGGAATTTCAAATTTAGTTCAAAATTTTAGTGATGGAGTATTAGTTCAAACAAATAGAGATTTAGATTTA GGAATTGTACAAGATGGTTTTTTCCGAGTTTTAGATTCTAAAGGTTACGTATATTATACAAGAAACGGTCATTTTTTACT TGATAAAAATAAAAATATTGTTAATGGACAGGGCATGTACTTAACTGGTCAAAATCAATTTGATTTAAAAAATAATTTAA ACAGTATATCTAATTTAGAACCTATTAATTTAAGAAAATCTGATTTGTTAAGTGCGAAAGCAACAAGTCAAATAAAATTA AAAGCTGATTTAATAAATGATTTTAGTTCTACAAATAGTATAACTGGAAAAAATGATGACATATCTAATTCAGAAATACA TGATATTACTATTTATGATAAAAATGAAAATCCTCACAAATTAAATATTTCTTTCAATCAAATTGATGATCATCAATGGA AATTAAATATACAATTAAATGACGAAAAAATACCAGATAATGAAATTATTAATGATAATTTTATTTTAAAATTTGATTCT GAAGGTAATTTAATTTCAAATTCTTCTCTTCAGATTAAATCAAAAAATTCTAAAAATATTATTTTAGATCCAATTACTCT AAATTTAGAATGTTTTCTTGAAAAATCAGAAACAAACATGCCTTCAATAGAATTGTCTCAAAACGGATATACAAAAGGTT TTTTAAAACATTTTGAAATTTTAAATAATGGTGAAATTATTGGACAATACACAAACGAAGAAGAACAAAAGATAGGGCAA ATATTTTTAGCAAAATTTATCAATCCAGAAAAGTTAAAACCTGAAAGTGGCAGTATTTGGTCAGCAACACATGAATCTGG ACAAGAAAAGATAGGAGCAGCTGGAGATCAAGGTTTTGGTTCACTATACACAAAATTTTTAGAATCATCAAATGTTGATT TAAATAAAGAACTAATTAACATGATTATTGCTCAGCGTAATTATCAATCTAGTGCTCAAGCTTTTAAAACAGAAGATAGA ATAATTAATACATTAGTTAATTTAAAATAA
Upstream 100 bases:
>100_bases GTAGGCACTGTAACATTATCAAAAATTCGTAAAATTCTGAAATAAAGATAATTAAATTTAAAAAAAATGTTATATTTAAA ATTATTAAGGAATAAATTAT
Downstream 100 bases:
>100_bases TTTTATAATCAAATTGGATCATCTAATGAACAAAGCAATATATGAATCTATGAATGCTGCTATTAAATTATTAGATAAAC AAGCAGTTATTGCTAATAAT
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGISNLVQNFSDGVLVQTNRDLDL GIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMYLTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKL KADLINDFSSTNSITGKNDDISNSEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFDS EGNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPSIELSQNGYTKGFLKHFEILNNGEIIGQYTNEEEQKIGQ IFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFGSLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDR IINTLVNLK
Sequences:
>Translated_409_residues MSIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGISNLVQNFSDGVLVQTNRDLDL GIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMYLTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKL KADLINDFSSTNSITGKNDDISNSEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFDS EGNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPSIELSQNGYTKGFLKHFEILNNGEIIGQYTNEEEQKIGQ IFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFGSLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDR IINTLVNLK >Mature_408_residues SIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGISNLVQNFSDGVLVQTNRDLDLG IVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMYLTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKLK ADLINDFSSTNSITGKNDDISNSEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFDSE GNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPSIELSQNGYTKGFLKHFEILNNGEIIGQYTNEEEQKIGQI FLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFGSLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRI INTLVNLK
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family
Homologues:
Organism=Escherichia coli, GI1787316, Length=415, Percent_Identity=37.3493975903614, Blast_Score=267, Evalue=9e-73,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGE_BUCAP (Q8K9K6)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660671.1 - ProteinModelPortal: Q8K9K6 - SMR: Q8K9K6 - EnsemblBacteria: EBBUCT00000000365 - GeneID: 1005538 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg328 - GeneTree: EBGT00050000007799 - HOGENOM: HBG579156 - OMA: QTANIEV - ProtClustDB: CLSK315899 - BioCyc: BAPH198804:BUSG328-MONOMER - InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR019776 - InterPro: IPR020013 - TIGRFAMs: TIGR03506
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE
EC number: NA
Molecular weight: Translated: 45947; Mature: 45816
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGIS CCHHHCCCCEEECCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH NLVQNFSDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMY HHHHHCCCCEEEEECCCCEEEEECCCEEEEECCCCEEEEECCCEEEEECCCCEECCCEEE LTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKLKADLINDFSSTNSITGKNDD EECCCCCCHHHCCHHHCCCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCC ISNSEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFDS CCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCEECCCEEEEECC EGNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPSIELSQNGYTKGFLKHFEI CCCEEECCEEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHH LNNGEIIGQYTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFG HCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEECHHHCCHHHCCCCCCCCHH SLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVNLK HHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGIS CHHHCCCCEEECCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH NLVQNFSDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMY HHHHHCCCCEEEEECCCCEEEEECCCEEEEECCCCEEEEECCCEEEEECCCCEECCCEEE LTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKLKADLINDFSSTNSITGKNDD EECCCCCCHHHCCHHHCCCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCC ISNSEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFDS CCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCEECCCEEEEECC EGNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPSIELSQNGYTKGFLKHFEI CCCEEECCEEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHH LNNGEIIGQYTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFG HCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEECHHHCCHHHCCCCCCCCHH SLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVNLK HHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438