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The map label for this gene is flgC

Identifier: 21672602

GI number: 21672602

Start: 372351

End: 372761

Strand: Direct

Name: flgC

Synonym: BUsg326

Alternate gene names: 21672602

Gene position: 372351-372761 (Clockwise)

Preceding gene: 21672601

Following gene: 21672603

Centisome position: 58.05

GC content: 25.55

Gene sequence:

>411_bases
ATGTCTTTATTAAATATACTTAATATCGCTGGTTCAGCTATGAGTGCTCAATCAGAAAAAATAAATGTTATTGCTAGTAA
TTTAGCTAATGCAGAAAGTATAGTATGCAAAGATGGAAAATTTTATCCATACATTGCAAAAAAAGTTATTTTTAAATTAG
ATCCATTAAAAAATTCTTTAATCGGTGGTGTAAAAGTTTTTTCTATAATAAACGATCTTAATCCAATGAAATTGATATAC
GATCCAAGTAATCCTTTATCTAATAAAAATGGATACGTTTTACAAACTAATGTTAATCCAGTTTCAGAAACAATAAATCA
TATTTCGGCTTCTAGAAGTTATCAAGCTAATGTAGAAGTATTAAAAACTGCAAAATCTATGATAATGAAAACATTATCAA
TTGGAGAATAA

Upstream 100 bases:

>100_bases
AGAATAGAATTTATAAAAAATACCTTAAAATATGAAGAAAATTTAGTTTTTATAAAAAACGAAATTAAAAATATAATGAA
TGTATTAAAGGGATAAAATT

Downstream 100 bases:

>100_bases
AGGAAGAAGAAATGGGTACTGTCAATATTAATTCTTCTATAAATAACAACATTATTGAAAATAATACTAATAATGTAAAA
AATAATTCTAATGCGCTAGA

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSLIGGVKVFSIINDLNPMKLIY
DPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEVLKTAKSMIMKTLSIGE

Sequences:

>Translated_136_residues
MSLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSLIGGVKVFSIINDLNPMKLIY
DPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEVLKTAKSMIMKTLSIGE
>Mature_135_residues
SLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSLIGGVKVFSIINDLNPMKLIYD
PSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEVLKTAKSMIMKTLSIGE

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787314, Length=136, Percent_Identity=54.4117647058823, Blast_Score=152, Evalue=8e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGC_BUCAP (Q8K9K8)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660669.1
- EnsemblBacteria:   EBBUCT00000000047
- GeneID:   1005531
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg326
- GeneTree:   EBGT00050000007906
- HOGENOM:   HBG700631
- OMA:   DKVVRDD
- ProtClustDB:   CLSK315897
- BioCyc:   BAPH198804:BUSG326-MONOMER
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299
- TIGRFAMs:   TIGR01395

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 14789; Mature: 14658

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSL
CCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHH
IGGVKVFSIINDLNPMKLIYDPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEV
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHH
LKTAKSMIMKTLSIGE
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSL
CHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHH
IGGVKVFSIINDLNPMKLIYDPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEV
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHH
LKTAKSMIMKTLSIGE
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438