Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is nuoI
Identifier: 21672444
GI number: 21672444
Start: 173808
End: 174350
Strand: Direct
Name: nuoI
Synonym: BUsg154
Alternate gene names: 21672444
Gene position: 173808-174350 (Clockwise)
Preceding gene: 21672443
Following gene: 21672445
Centisome position: 27.1
GC content: 29.47
Gene sequence:
>543_bases ATGACTGTAAAAGAAATTATTATTGGATTTTTACTGCAAATAAGAAGTATTTTGATGGTTTTCAAAAACATATTTTCTAA ATCTGAAACTAAAATGTATCCAGAAGAAAAATTATATTTATCTCCTCGATATCGAGGTCGAGTGATTTTAACACGTAATA TTGATGGAGGAGAACGTTGTGTCGCTTGTAATTTATGTGCTGTAGTGTGTCCTGTTGATTGTATTTCTCTTCAAAAATCC GAAAAAAAAAATGGTCGTTGGTATCCAAAATTTTTTAGAATCAATTTTTCTCGTTGTATTTTTTGTGGATTATGCGAAGA AGCATGTCCTACAGCTGCTATTCAACTTATGCCTGATTTTGAATTATCAGATTTTAACAGACAAAATTTAGTTTATGAAA AAGAAGATTTATTAATTTCGGGTCCAGGAAAATATCCGGATTATGATTTTTATCGTTTTTCTGGTGTAGTTATCAAAGAT AAGAAGGTAGATAAGTTAGAAGGTCAATTAAAACCTGTAAATGTGAAAGATTTATTACCATAG
Upstream 100 bases:
>100_bases AATGTCTTTTGGATGGAAAATTTGTTTACCGTTAACGCTATTGAATTTAATTATAACAGCTTTTTTTATATTAATATAAG CTTTATTAAGAGATAATTAT
Downstream 100 bases:
>100_bases AGAGGATTAGTTCAATGGAATTTGTTTTTTACGCATGTTCTTTGATAGCTGTTATTTCTACTTTATTAGTTATTATTCAA AAAAATGCAGTATATTCTTT
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTVKEIIIGFLLQIRSILMVFKNIFSKSETKMYPEEKLYLSPRYRGRVILTRNIDGGERCVACNLCAVVCPVDCISLQKS EKKNGRWYPKFFRINFSRCIFCGLCEEACPTAAIQLMPDFELSDFNRQNLVYEKEDLLISGPGKYPDYDFYRFSGVVIKD KKVDKLEGQLKPVNVKDLLP
Sequences:
>Translated_180_residues MTVKEIIIGFLLQIRSILMVFKNIFSKSETKMYPEEKLYLSPRYRGRVILTRNIDGGERCVACNLCAVVCPVDCISLQKS EKKNGRWYPKFFRINFSRCIFCGLCEEACPTAAIQLMPDFELSDFNRQNLVYEKEDLLISGPGKYPDYDFYRFSGVVIKD KKVDKLEGQLKPVNVKDLLP >Mature_179_residues TVKEIIIGFLLQIRSILMVFKNIFSKSETKMYPEEKLYLSPRYRGRVILTRNIDGGERCVACNLCAVVCPVDCISLQKSE KKNGRWYPKFFRINFSRCIFCGLCEEACPTAAIQLMPDFELSDFNRQNLVYEKEDLLISGPGKYPDYDFYRFSGVVIKDK KVDKLEGQLKPVNVKDLLP
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=127, Percent_Identity=40.1574803149606, Blast_Score=107, Evalue=6e-24, Organism=Escherichia coli, GI1788617, Length=180, Percent_Identity=68.3333333333333, Blast_Score=274, Evalue=2e-75, Organism=Escherichia coli, GI1789075, Length=117, Percent_Identity=32.4786324786325, Blast_Score=63, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555194, Length=132, Percent_Identity=38.6363636363636, Blast_Score=106, Evalue=8e-24, Organism=Drosophila melanogaster, GI17864306, Length=128, Percent_Identity=40.625, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI_BUCAP (Q8K9Y0)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660511.1 - ProteinModelPortal: Q8K9Y0 - SMR: Q8K9Y0 - EnsemblBacteria: EBBUCT00000000191 - GeneID: 1005352 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg154 - GeneTree: EBGT00050000007927 - HOGENOM: HBG724359 - OMA: RYWSVAG - ProtClustDB: PRK05888 - BioCyc: BAPH198804:BUSG154-MONOMER - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10 - TIGRFAMs: TIGR01971
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 20815; Mature: 20684
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKEIIIGFLLQIRSILMVFKNIFSKSETKMYPEEKLYLSPRYRGRVILTRNIDGGERC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEE VACNLCAVVCPVDCISLQKSEKKNGRWYPKFFRINFSRCIFCGLCEEACPTAAIQLMPDF EEECHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHEEEHHHHHCCCCEEEEECCCC ELSDFNRQNLVYEKEDLLISGPGKYPDYDFYRFSGVVIKDKKVDKLEGQLKPVNVKDLLP CCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEEEEECCCCHHHCCCCCCCCHHHCCC >Mature Secondary Structure TVKEIIIGFLLQIRSILMVFKNIFSKSETKMYPEEKLYLSPRYRGRVILTRNIDGGERC CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEE VACNLCAVVCPVDCISLQKSEKKNGRWYPKFFRINFSRCIFCGLCEEACPTAAIQLMPDF EEECHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHEEEHHHHHCCCCEEEEECCCC ELSDFNRQNLVYEKEDLLISGPGKYPDYDFYRFSGVVIKDKKVDKLEGQLKPVNVKDLLP CCCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEEEEECCCCHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12089438