Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is apaH
Identifier: 21672425
GI number: 21672425
Start: 149082
End: 149903
Strand: Direct
Name: apaH
Synonym: BUsg135
Alternate gene names: 21672425
Gene position: 149082-149903 (Clockwise)
Preceding gene: 21672424
Following gene: 21672434
Centisome position: 23.24
GC content: 25.18
Gene sequence:
>822_bases ATGAGCATTTATTTTATCAGTGATATTCATGGTTGTTATAAAGAATTCAAGTTACTTTTAAAAAAATCTTTTTTTAATGA TAAAAAAGATTTTTTATGGATTGCAGGTGATCTAGTATCTAGAGGACCAGATTCTCTTAAAGTAATAAGATATCTTTATT CTTTAAGAAAACGAATAAAAATCATACTTGGAAATCATGATTTAAACTTAATTGCAGTGTATTCTGGTGTTAAAGAAAAT AAAAAAGAAAATTATTTTGATGAATTTTTATCTGCAAAAGATAATTTACAATTGATTAATTGGTTGCGATGTCAATCTAT TTTAAAAATTGATGAAGAAAGAAAAATTATTATGTCACATGCTGGTATTAGTCCTAAATGGGATATCGATACAGCAAAAA AATATGCGTTAGAAATTGAAAAATGTTTATCAGGTAAAAATTATTCTTCATTTTTAAGATCTGTTTTTAACAATAAAATT AATTATTGGAACTTAAATTTAAATAAATTAGACCGATTACGATATAGTATTAACGTTTTTACGCGTATGCGATATTGTTA TCCTGATAGTAGATTAAACCTTATTTGTAAAAAATCTCCTAATTTAGTTAAATATCCTCTGATACCATGGTTTAAAATAC CAAATAAGATTCCAAAAGAATATTCAGTTTTTTTTGGACACTGGTCTTCTTTAATAGGAACAAAGGTACCTCAACCATTT TTTCCATTAGATAGTGGTTGTTGTTGGGGAGGAAAATTAACCATGTTTCGATGGGAAGATAAAAAATACTTTTTTCAATC TTTTCAAAAAAACAATAGTTAA
Upstream 100 bases:
>100_bases TACTGCAGTATTGCCAACTATCTAATTATATAATTGAAAATGATATTTTAAAAAATAAAAATTTTAATTAATTATTTTCT TTTAAAAAAGTGAAAAATAT
Downstream 100 bases:
>100_bases AATTAAATTAAAAATATTTAATTAATATATTTTTTTATCTTGATAAAATTTCAAAACAAAAATTATAAGGATTATTTTTA TCTTTAAAATGTTGTTTTCT
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSIYFISDIHGCYKEFKLLLKKSFFNDKKDFLWIAGDLVSRGPDSLKVIRYLYSLRKRIKIILGNHDLNLIAVYSGVKEN KKENYFDEFLSAKDNLQLINWLRCQSILKIDEERKIIMSHAGISPKWDIDTAKKYALEIEKCLSGKNYSSFLRSVFNNKI NYWNLNLNKLDRLRYSINVFTRMRYCYPDSRLNLICKKSPNLVKYPLIPWFKIPNKIPKEYSVFFGHWSSLIGTKVPQPF FPLDSGCCWGGKLTMFRWEDKKYFFQSFQKNNS
Sequences:
>Translated_273_residues MSIYFISDIHGCYKEFKLLLKKSFFNDKKDFLWIAGDLVSRGPDSLKVIRYLYSLRKRIKIILGNHDLNLIAVYSGVKEN KKENYFDEFLSAKDNLQLINWLRCQSILKIDEERKIIMSHAGISPKWDIDTAKKYALEIEKCLSGKNYSSFLRSVFNNKI NYWNLNLNKLDRLRYSINVFTRMRYCYPDSRLNLICKKSPNLVKYPLIPWFKIPNKIPKEYSVFFGHWSSLIGTKVPQPF FPLDSGCCWGGKLTMFRWEDKKYFFQSFQKNNS >Mature_272_residues SIYFISDIHGCYKEFKLLLKKSFFNDKKDFLWIAGDLVSRGPDSLKVIRYLYSLRKRIKIILGNHDLNLIAVYSGVKENK KENYFDEFLSAKDNLQLINWLRCQSILKIDEERKIIMSHAGISPKWDIDTAKKYALEIEKCLSGKNYSSFLRSVFNNKIN YWNLNLNKLDRLRYSINVFTRMRYCYPDSRLNLICKKSPNLVKYPLIPWFKIPNKIPKEYSVFFGHWSSLIGTKVPQPFF PLDSGCCWGGKLTMFRWEDKKYFFQSFQKNNS
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=271, Percent_Identity=48.3394833948339, Blast_Score=305, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_BUCAP (Q8K9Z9)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660492.1 - ProteinModelPortal: Q8K9Z9 - SMR: Q8K9Z9 - EnsemblBacteria: EBBUCT00000000093 - GeneID: 1005952 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg135 - GeneTree: EBGT00050000008157 - HOGENOM: HBG724457 - OMA: LVFGHWA - ProtClustDB: PRK00166 - BioCyc: BAPH198804:BUSG135-MONOMER - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 32424; Mature: 32293
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYFISDIHGCYKEFKLLLKKSFFNDKKDFLWIAGDLVSRGPDSLKVIRYLYSLRKRIK CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHEE IILGNHDLNLIAVYSGVKENKKENYFDEFLSAKDNLQLINWLRCQSILKIDEERKIIMSH EEECCCCCEEEEEECCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEEHH AGISPKWDIDTAKKYALEIEKCLSGKNYSSFLRSVFNNKINYWNLNLNKLDRLRYSINVF CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH TRMRYCYPDSRLNLICKKSPNLVKYPLIPWFKIPNKIPKEYSVFFGHWSSLIGTKVPQPF HHHHEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC FPLDSGCCWGGKLTMFRWEDKKYFFQSFQKNNS CCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCC >Mature Secondary Structure SIYFISDIHGCYKEFKLLLKKSFFNDKKDFLWIAGDLVSRGPDSLKVIRYLYSLRKRIK EEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHEE IILGNHDLNLIAVYSGVKENKKENYFDEFLSAKDNLQLINWLRCQSILKIDEERKIIMSH EEECCCCCEEEEEECCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEEHH AGISPKWDIDTAKKYALEIEKCLSGKNYSSFLRSVFNNKINYWNLNLNKLDRLRYSINVF CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH TRMRYCYPDSRLNLICKKSPNLVKYPLIPWFKIPNKIPKEYSVFFGHWSSLIGTKVPQPF HHHHEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC FPLDSGCCWGGKLTMFRWEDKKYFFQSFQKNNS CCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438