Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is aroH [H]
Identifier: 21672407
GI number: 21672407
Start: 129783
End: 130829
Strand: Direct
Name: aroH [H]
Synonym: BUsg116
Alternate gene names: 21672407
Gene position: 129783-130829 (Clockwise)
Preceding gene: 21672406
Following gene: 21672408
Centisome position: 20.23
GC content: 31.9
Gene sequence:
>1047_bases ATGAAAAAAACAGATGAACTACGTACAATACGAATTGATCCATTGATAACACCATCTGAATTAGCAAAAAAATATGCTAT TACTTCAGAAATCATGGATAATGTTATTATAACGAGACAAAATATAGCTCGAATTATGACTGGAGAAGATTTGCGTTTGC TTGTTGTAATAGGTCCATGTTCAGTACATGATCCAATTGCAGCAGTTGAATATGCTCATCGATTATATGAACTACGTAAA AAATATCAAGATCGTCTTGAAATTATAATGCGTACATATTTTGAAAAACCAAGAACAGTAGTTGGTTGGAAGGGATTAAT TTCAGATCCAGATTTAAATGGTAGTTTCAGAGTTAATCATGGTTTAGCTGTTGCACGTAAATTATTATTAGATATCAATG AACTAGGAATGCCTGCAGCAACAGAGTTTTTAGATATGGTAATAGGGCAATTTATTGCGGATTTAATTAGCTGGGGTGCG ATTGGAGCTAGAACTACTGAAAGTCAAATTCATAGAGAAATGGCTTCAGCTCTTTCTTGTCCAGTAGGTTTTAAAAATGG AACAGATGGAAATATACGTATTGCAATTGATGCTATTAGAGCAGCACAAGCACGTCATTTGTTTTTTGCTCCGAATAAAG ATGGACAAATGACTATTAATCATACCAGTGGAAATCCTTATGGACATATAATTATGAGAGGTGGTCGAACTCCTAATTAT CATGCTCACGATATTAATTCAGCAATAGAACATTTACGTGAATTTAATTTGTTAGAACATTTAATGATTGATTTTAGTCA TGGTAATTGTTTAAAGGAACATATTCGTCAAAAAGATGTTGCTAAATCTGTTTCAAAACAAATTTCTCAAGGTTCAAAAA CTATATTTGGTGTAATGATTGAAAGTTTTTTAGAAGAAGGTTTTCAAACAGTTAAAGAAAATCAACCACTAATATATGGA AAATCAATTACTGATGCATGTTTAAATTGGAAAGACAGTGTCCTTATTATTAAGCAATTAGCAGATGCGGTAGATACTCG TTTTTAA
Upstream 100 bases:
>100_bases TAAAAATTTATTAGAAATGAGTTTATGACTAGTTAGTTTATCGTGATTTTATCACATCTTGCTATTCTTTTCAGGATAAA AAATTCATTTAGAGAACAAA
Downstream 100 bases:
>100_bases TAATTATTGTGTATGCTAGTCAAAAATTTGACTAGCATCTTTTTATTAAACTCAACAGTTGAAATTTTTTAAATAATTTT TAAAAAATAATATTTTTTTA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKKTDELRTIRIDPLITPSELAKKYAITSEIMDNVIITRQNIARIMTGEDLRLLVVIGPCSVHDPIAAVEYAHRLYELRK KYQDRLEIIMRTYFEKPRTVVGWKGLISDPDLNGSFRVNHGLAVARKLLLDINELGMPAATEFLDMVIGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIRIAIDAIRAAQARHLFFAPNKDGQMTINHTSGNPYGHIIMRGGRTPNY HAHDINSAIEHLREFNLLEHLMIDFSHGNCLKEHIRQKDVAKSVSKQISQGSKTIFGVMIESFLEEGFQTVKENQPLIYG KSITDACLNWKDSVLIIKQLADAVDTRF
Sequences:
>Translated_348_residues MKKTDELRTIRIDPLITPSELAKKYAITSEIMDNVIITRQNIARIMTGEDLRLLVVIGPCSVHDPIAAVEYAHRLYELRK KYQDRLEIIMRTYFEKPRTVVGWKGLISDPDLNGSFRVNHGLAVARKLLLDINELGMPAATEFLDMVIGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIRIAIDAIRAAQARHLFFAPNKDGQMTINHTSGNPYGHIIMRGGRTPNY HAHDINSAIEHLREFNLLEHLMIDFSHGNCLKEHIRQKDVAKSVSKQISQGSKTIFGVMIESFLEEGFQTVKENQPLIYG KSITDACLNWKDSVLIIKQLADAVDTRF >Mature_348_residues MKKTDELRTIRIDPLITPSELAKKYAITSEIMDNVIITRQNIARIMTGEDLRLLVVIGPCSVHDPIAAVEYAHRLYELRK KYQDRLEIIMRTYFEKPRTVVGWKGLISDPDLNGSFRVNHGLAVARKLLLDINELGMPAATEFLDMVIGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNIRIAIDAIRAAQARHLFFAPNKDGQMTINHTSGNPYGHIIMRGGRTPNY HAHDINSAIEHLREFNLLEHLMIDFSHGNCLKEHIRQKDVAKSVSKQISQGSKTIFGVMIESFLEEGFQTVKENQPLIYG KSITDACLNWKDSVLIIKQLADAVDTRF
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=348, Percent_Identity=68.6781609195402, Blast_Score=519, Evalue=1e-148, Organism=Escherichia coli, GI1786969, Length=345, Percent_Identity=55.9420289855072, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1788953, Length=327, Percent_Identity=48.6238532110092, Blast_Score=334, Evalue=5e-93, Organism=Saccharomyces cerevisiae, GI6320240, Length=354, Percent_Identity=43.7853107344633, Blast_Score=305, Evalue=9e-84, Organism=Saccharomyces cerevisiae, GI6319726, Length=346, Percent_Identity=45.6647398843931, Blast_Score=303, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39149; Mature: 39149
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTDELRTIRIDPLITPSELAKKYAITSEIMDNVIITRQNIARIMTGEDLRLLVVIGPC CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC SVHDPIAAVEYAHRLYELRKKYQDRLEIIMRTYFEKPRTVVGWKGLISDPDLNGSFRVNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECH GLAVARKLLLDINELGMPAATEFLDMVIGQFIADLISWGAIGARTTESQIHREMASALSC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNIRIAIDAIRAAQARHLFFAPNKDGQMTINHTSGNPYGHIIMRGGRTPNY CCCCCCCCCCEEEEEEEHHHHHHHCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC HAHDINSAIEHLREFNLLEHLMIDFSHGNCLKEHIRQKDVAKSVSKQISQGSKTIFGVMI CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ESFLEEGFQTVKENQPLIYGKSITDACLNWKDSVLIIKQLADAVDTRF HHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKTDELRTIRIDPLITPSELAKKYAITSEIMDNVIITRQNIARIMTGEDLRLLVVIGPC CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC SVHDPIAAVEYAHRLYELRKKYQDRLEIIMRTYFEKPRTVVGWKGLISDPDLNGSFRVNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECH GLAVARKLLLDINELGMPAATEFLDMVIGQFIADLISWGAIGARTTESQIHREMASALSC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNIRIAIDAIRAAQARHLFFAPNKDGQMTINHTSGNPYGHIIMRGGRTPNY CCCCCCCCCCEEEEEEEHHHHHHHCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC HAHDINSAIEHLREFNLLEHLMIDFSHGNCLKEHIRQKDVAKSVSKQISQGSKTIFGVMI CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ESFLEEGFQTVKENQPLIYGKSITDACLNWKDSVLIIKQLADAVDTRF HHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]