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The map label for this gene is ydgP

Identifier: 21672400

GI number: 21672400

Start: 122083

End: 122691

Strand: Direct

Name: ydgP

Synonym: BUsg109

Alternate gene names: 21672400

Gene position: 122083-122691 (Clockwise)

Preceding gene: 21672399

Following gene: 21672401

Centisome position: 19.03

GC content: 23.81

Gene sequence:

>609_bases
ATGAAATCTTTTAAAGAAACTATAATAAATGCATGTTTAATGGGATTTTTTTCTTTTTTTTCTCTTTCAAGTGTCATTTT
TGTTAAAAACATAACAAATAATCAAATAAAAAATATAAAAGAAAAACAAAAAAATACTCTTATTCAACAAGTTATACCAA
GAGTTATGTACCATTCCTTTGAAAAAAAATATTTTTTGATAAAGGATAAATTATTAGGAGATCAAAAAAAACATAATTTA
TGGCTTCTTTTTAAAAACAAACAAGCTAAAGTAGCTGTTGTTGAAAGTATTGCTCCAGATGGATATTCTGGTTCAATTTC
TATCTTAGTAGCTGCATATCTTAATGGAAAAATTATTGGTGTACGAGTTTTATCTCATAAAGAAACTCCAGGAATTGGAG
ATAAAATTGAAATATCTATTTCTAATTGGATTACAAAATTTCAAGATATGAATGTAATTGATTTAAAAGATAAAAAATTT
TTATTAAAAAAGTATGGGGGTAAGATTGAACAATTTACAGGAGCTACTATTACACCTCAATCAGTTTCTAACGCTGTAAA
AAGAACTGTTGTTTTTATTAAGAAAATACCATTAATATTTTCATTATAA

Upstream 100 bases:

>100_bases
ATTATCCAGATGGCATTGCTTTTTCAGTATTATTTGCTAATATGATTGTTCCATTAATGGATGCTTATTTAAAGACATCT
GGATATGGTCATAAAAATTT

Downstream 100 bases:

>100_bases
TAGAGTAAAAATATATATGGAATTCAAAAAATTTTTTAAAAAGAGATTGTGGAATAATAATTCTTCTTTAGTACAGCTTT
TAGGTTTATGTCCAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKSFKETIINACLMGFFSFFSLSSVIFVKNITNNQIKNIKEKQKNTLIQQVIPRVMYHSFEKKYFLIKDKLLGDQKKHNL
WLLFKNKQAKVAVVESIAPDGYSGSISILVAAYLNGKIIGVRVLSHKETPGIGDKIEISISNWITKFQDMNVIDLKDKKF
LLKKYGGKIEQFTGATITPQSVSNAVKRTVVFIKKIPLIFSL

Sequences:

>Translated_202_residues
MKSFKETIINACLMGFFSFFSLSSVIFVKNITNNQIKNIKEKQKNTLIQQVIPRVMYHSFEKKYFLIKDKLLGDQKKHNL
WLLFKNKQAKVAVVESIAPDGYSGSISILVAAYLNGKIIGVRVLSHKETPGIGDKIEISISNWITKFQDMNVIDLKDKKF
LLKKYGGKIEQFTGATITPQSVSNAVKRTVVFIKKIPLIFSL
>Mature_202_residues
MKSFKETIINACLMGFFSFFSLSSVIFVKNITNNQIKNIKEKQKNTLIQQVIPRVMYHSFEKKYFLIKDKLLGDQKKHNL
WLLFKNKQAKVAVVESIAPDGYSGSISILVAAYLNGKIIGVRVLSHKETPGIGDKIEISISNWITKFQDMNVIDLKDKKF
LLKKYGGKIEQFTGATITPQSVSNAVKRTVVFIKKIPLIFSL

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=189, Percent_Identity=37.037037037037, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_BUCAP (Q8KA18)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660467.1
- EnsemblBacteria:   EBBUCT00000000507
- GeneID:   1005926
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg109
- GeneTree:   EBGT00050000008160
- HOGENOM:   HBG454413
- OMA:   ETIINAC
- ProtClustDB:   CLSK315396
- BioCyc:   BAPH198804:BUSG109-MONOMER
- GO:   GO:0016020
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 22949; Mature: 22949

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFKETIINACLMGFFSFFSLSSVIFVKNITNNQIKNIKEKQKNTLIQQVIPRVMYHSF
CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKYFLIKDKLLGDQKKHNLWLLFKNKQAKVAVVESIAPDGYSGSISILVAAYLNGKIIG
CCEEEEEEHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEECCCEEEE
VRVLSHKETPGIGDKIEISISNWITKFQDMNVIDLKDKKFLLKKYGGKIEQFTGATITPQ
EEEEECCCCCCCCCEEEEEHHHHHHHHCCCCEEECCHHHHHHHHHCCCHHHCCCCEECHH
SVSNAVKRTVVFIKKIPLIFSL
HHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MKSFKETIINACLMGFFSFFSLSSVIFVKNITNNQIKNIKEKQKNTLIQQVIPRVMYHSF
CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKYFLIKDKLLGDQKKHNLWLLFKNKQAKVAVVESIAPDGYSGSISILVAAYLNGKIIG
CCEEEEEEHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEECCCEEEE
VRVLSHKETPGIGDKIEISISNWITKFQDMNVIDLKDKKFLLKKYGGKIEQFTGATITPQ
EEEEECCCCCCCCCEEEEEHHHHHHHHCCCCEEECCHHHHHHHHHCCCHHHCCCCEECHH
SVSNAVKRTVVFIKKIPLIFSL
HHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438