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The map label for this gene is fliN

Identifier: 21672366

GI number: 21672366

Start: 84923

End: 85324

Strand: Direct

Name: fliN

Synonym: BUsg074

Alternate gene names: 21672366

Gene position: 84923-85324 (Clockwise)

Preceding gene: 21672365

Following gene: 21672367

Centisome position: 13.24

GC content: 18.66

Gene sequence:

>402_bases
ATGAAAAAAGTAGAAAAAAAAGATAATTTTAAAAAATTTAAAAATGATAATATATATAAAAAAGATGACAAAAATATTAA
TCAAGAGCTAATTAATGAAGAAAAAAAAATAAAAAATTTCAATAGTTCTAATAATGAATCATCAAATGAAAAAAAAATAC
TTTTTGATATAGAAATGAATATAACTGTAGAATTAGGAAAATCAAAAGTAAAAATAAAAGATTTACTAAATTTTTCAAAA
GGAAGTATGCTCTTCTTACAAAGAAAAAAAGAAGATCCTCTAAAAGTTTTTGCGAATAACAAACTAATTGCTTTAGGTGA
AATTGTATTTTCTAATAATAAATATGGCATTCGTATTATCAGTATAAATAATTCTTTAAATGGTATTAATACATCAGTTT
AA

Upstream 100 bases:

>100_bases
TTTTTAGGAAAACATAAGATTTTTGATGAAAAATCTATCATTTTTTTAGAAAAATTTCTTCATCAAAACTTAGAAAAAAA
ATAATGTAAGGAAAATTTTA

Downstream 100 bases:

>100_bases
ATTTTATGGAAAATAATGTGTATTCGCAAATAGCACCAAGTATATTTAAAAGAATTTTTGATGACACAAACATTTTTCAT
GTAATGAGTTCATTATTTGG

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKKVEKKDNFKKFKNDNIYKKDDKNINQELINEEKKIKNFNSSNNESSNEKKILFDIEMNITVELGKSKVKIKDLLNFSK
GSMLFLQRKKEDPLKVFANNKLIALGEIVFSNNKYGIRIISINNSLNGINTSV

Sequences:

>Translated_133_residues
MKKVEKKDNFKKFKNDNIYKKDDKNINQELINEEKKIKNFNSSNNESSNEKKILFDIEMNITVELGKSKVKIKDLLNFSK
GSMLFLQRKKEDPLKVFANNKLIALGEIVFSNNKYGIRIISINNSLNGINTSV
>Mature_133_residues
MKKVEKKDNFKKFKNDNIYKKDDKNINQELINEEKKIKNFNSSNNESSNEKKILFDIEMNITVELGKSKVKIKDLLNFSK
GSMLFLQRKKEDPLKVFANNKLIALGEIVFSNNKYGIRIISINNSLNGINTSV

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family

Homologues:

Organism=Escherichia coli, GI1788256, Length=70, Percent_Identity=41.4285714285714, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIN_BUCAP (Q8KA38)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660433.1
- ProteinModelPortal:   Q8KA38
- EnsemblBacteria:   EBBUCT00000000150
- GeneID:   1005890
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg074
- GeneTree:   EBGT00050000008035
- HOGENOM:   HBG536886
- OMA:   DIEMNIT
- ProtClustDB:   CLSK315202
- BioCyc:   BAPH198804:BUSG074-MONOMER
- GO:   GO:0006935
- InterPro:   IPR001172
- InterPro:   IPR001543
- PRINTS:   PR00956

Pfam domain/function: PF01052 SpoA; SSF101801 SpoA

EC number: NA

Molecular weight: Translated: 15403; Mature: 15403

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVEKKDNFKKFKNDNIYKKDDKNINQELINEEKKIKNFNSSNNESSNEKKILFDIEMN
CCCCCCCCCHHHHCCCCCEECCCCCCCHHHHCHHHHHHCCCCCCCCCCCCCEEEEEEEEE
ITVELGKSKVKIKDLLNFSKGSMLFLQRKKEDPLKVFANNKLIALGEIVFSNNKYGIRII
EEEEECCCEEEEHHHHCCCCCCEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCEEEEE
SINNSLNGINTSV
EECCCCCCCCCCC
>Mature Secondary Structure
MKKVEKKDNFKKFKNDNIYKKDDKNINQELINEEKKIKNFNSSNNESSNEKKILFDIEMN
CCCCCCCCCHHHHCCCCCEECCCCCCCHHHHCHHHHHHCCCCCCCCCCCCCEEEEEEEEE
ITVELGKSKVKIKDLLNFSKGSMLFLQRKKEDPLKVFANNKLIALGEIVFSNNKYGIRII
EEEEECCCEEEEHHHHCCCCCCEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCEEEEE
SINNSLNGINTSV
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438