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The map label for this gene is atpC

Identifier: 21672303

GI number: 21672303

Start: 8205

End: 8621

Strand: Direct

Name: atpC

Synonym: BUsg009

Alternate gene names: 21672303

Gene position: 8205-8621 (Clockwise)

Preceding gene: 21672302

Following gene: 21672307

Centisome position: 1.28

GC content: 29.5

Gene sequence:

>417_bases
ATGGATTTTTACTTAGATATTGTTAGTGTTGAAAAGCGCATATTTTCTGGATTAGTCGATAGAATACAGGTATCTGGAAG
TGAAGGAGAAATGGGAATTTATCCAGGACATACTCAATTGTTGAGTATAATTAAACCAGGTGTAATATATATATTTCATA
AAAATAAAACAGAAGAATGTCTTTATATATCTGGAGGTATTTTAGAAGTTCAACCTTCCGTTGTTTCTATTTTAGCAGAT
GTTGCTATTCGTGGTATTGATTTAGATCGAAAACGTGTTGTAAAAGCGAAAAAACAAGCTGAAGAATATTTTAAAAAAGA
AACTACAAATGTCAAAAAAGACGATGTTTTGCTCGAGATTTCTAAAGCAATTGCAAAATTACGTGTTCTTGAGATTATGG
ATAAATTTAAGAAATAA

Upstream 100 bases:

>100_bases
ATTTGATAATTTACCAGAGCAGGCGTTTTATATGGTAGGTACTATTGAAGAAGTAATAAAAAAAGCAAAATTATTATAAT
TAAATATTTTGGATATATCC

Downstream 100 bases:

>100_bases
AGATCTTTCGCGGCTGGTTTTTTCCTGCCGCAATCATTATTTAGATAGTTTATAGAATTAAAAAAAAAATTTAAGATATT
TTATAATTTTTTAAATTATA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDFYLDIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEECLYISGGILEVQPSVVSILAD
VAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEISKAIAKLRVLEIMDKFKK

Sequences:

>Translated_138_residues
MDFYLDIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEECLYISGGILEVQPSVVSILAD
VAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEISKAIAKLRVLEIMDKFKK
>Mature_138_residues
MDFYLDIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEECLYISGGILEVQPSVVSILAD
VAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEISKAIAKLRVLEIMDKFKK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=135, Percent_Identity=54.0740740740741, Blast_Score=156, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_BUCAP (O51871)

Other databases:

- EMBL:   AF008210
- EMBL:   AE013218
- RefSeq:   NP_660370.1
- ProteinModelPortal:   O51871
- SMR:   O51871
- EnsemblBacteria:   EBBUCT00000000417
- GeneID:   1005825
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg009
- GeneTree:   EBGT00050000008020
- HOGENOM:   HBG663981
- OMA:   ARAELME
- ProtClustDB:   PRK00571
- BioCyc:   BAPH198804:BUSG009-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15630; Mature: 15630

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYLDIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEEC
CCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCEECCHHHHHHHHCCCEEEEEECCCCCCE
LYISGGILEVQPSVVSILADVAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEI
EEEECCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SKAIAKLRVLEIMDKFKK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFYLDIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEEC
CCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCEECCHHHHHHHHCCCEEEEEECCCCCCE
LYISGGILEVQPSVVSILADVAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEI
EEEECCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SKAIAKLRVLEIMDKFKK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9216881; 9516544; 12089438