Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213691005
Identifier: 213691005
GI number: 213691005
Start: 98505
End: 99206
Strand: Reverse
Name: 213691005
Synonym: Blon_0083
Alternate gene names: NA
Gene position: 99206-98505 (Counterclockwise)
Preceding gene: 213691006
Following gene: 213691004
Centisome position: 3.5
GC content: 60.68
Gene sequence:
>702_bases ATGAGCGTTCTCGACCGTTTTGAAAAAAGCGTGGAGGGTGCAGTCAACGGAGTATTCGCCAAGTTCGGCTCCAAAGACCT GCAGCCTGTCGATCTTTCCAGCGCCTTGGAGCGCGAGATTGACGCCGAGGCCATGCCCGTGGGCCGTGACCGCACGGTGG CCCCGAATGAATACCGTTTCAAGCTCAGTACTCCTGACTTCGACCGTATCGAGGCATGGGGTAGCGAGACCCTGGCCAAT GAGCTGGCCGACAATCTCACCGAGTACGCGAAGAGCCAGCATTACGCCTTCGTGGGCCCGGTGATTGTGATCTTCGAGGA AGACCTTGACCTGTCCAAGGGCAACTTCAACCTCACCTCCGAATCCGTGCAAGGCAATGCCGTGCCGGTCACCACCGATG CGCAGACCGAGGACAGCCCAGTGCTCGAGGTGAACGGCAACCAGTACCTGCTCACCAAAGACAAGACGGTAATCGGCCGC GGTTCCGGTTGCGATATCGTCATTGACGATCCGGGCATCTCCCGCAAGCACCTGGAAATCGACATCACCGACAACGGCGT TATCGCCCGCGACCTGGGCTCCACCAACGGCACGTACGTGGAGGGCCACCAAGTGCCCGCCGCCACGCTGCTCGACGGCA ACACCATCACCATCGGCCGCACCCGCATCCTGTATTGGGCCTCCGCCCAAGCCCAGGAGTAG
Upstream 100 bases:
>100_bases ATTTTTGGATATTTTGCACTCATCGCCACACAGAAGACCGGTTTTTTGCCTCATATTCCCATCACCGCGTAGGATGGGTG AGGATTAGAAAGGGAGGACT
Downstream 100 bases:
>100_bases TCGAGCACACGCCCGAAAGCCGTCCACCCATGACTGAACTGACATTCGCCCTGCTCAAGTATGGATTCCTGATCCTGCTG TGGATATTCATCTGGCTGGC
Product: FHA domain containing protein
Products: NA
Alternate protein names: FHA Domain-Containing Protein; Forkhead-Associated Protein; FHA Domain Protein; LOW QUALITY PROTEIN FHA Domain Protein; Signal Transduction Protein; Sigma-54 Dependent Transcriptional Regulator Fis Family; Signaling Protein; Protein Containing Forkhead-Associated Domain
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSVLDRFEKSVEGAVNGVFAKFGSKDLQPVDLSSALEREIDAEAMPVGRDRTVAPNEYRFKLSTPDFDRIEAWGSETLAN ELADNLTEYAKSQHYAFVGPVIVIFEEDLDLSKGNFNLTSESVQGNAVPVTTDAQTEDSPVLEVNGNQYLLTKDKTVIGR GSGCDIVIDDPGISRKHLEIDITDNGVIARDLGSTNGTYVEGHQVPAATLLDGNTITIGRTRILYWASAQAQE
Sequences:
>Translated_233_residues MSVLDRFEKSVEGAVNGVFAKFGSKDLQPVDLSSALEREIDAEAMPVGRDRTVAPNEYRFKLSTPDFDRIEAWGSETLAN ELADNLTEYAKSQHYAFVGPVIVIFEEDLDLSKGNFNLTSESVQGNAVPVTTDAQTEDSPVLEVNGNQYLLTKDKTVIGR GSGCDIVIDDPGISRKHLEIDITDNGVIARDLGSTNGTYVEGHQVPAATLLDGNTITIGRTRILYWASAQAQE >Mature_232_residues SVLDRFEKSVEGAVNGVFAKFGSKDLQPVDLSSALEREIDAEAMPVGRDRTVAPNEYRFKLSTPDFDRIEAWGSETLANE LADNLTEYAKSQHYAFVGPVIVIFEEDLDLSKGNFNLTSESVQGNAVPVTTDAQTEDSPVLEVNGNQYLLTKDKTVIGRG SGCDIVIDDPGISRKHLEIDITDNGVIARDLGSTNGTYVEGHQVPAATLLDGNTITIGRTRILYWASAQAQE
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25353; Mature: 25222
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLDRFEKSVEGAVNGVFAKFGSKDLQPVDLSSALEREIDAEAMPVGRDRTVAPNEYRF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE KLSTPDFDRIEAWGSETLANELADNLTEYAKSQHYAFVGPVIVIFEEDLDLSKGNFNLTS EECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCEEEC ESVQGNAVPVTTDAQTEDSPVLEVNGNQYLLTKDKTVIGRGSGCDIVIDDPGISRKHLEI CCCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCEEEECCCCCEEEECCCCCCCEEEEE DITDNGVIARDLGSTNGTYVEGHQVPAATLLDGNTITIGRTRILYWASAQAQE EECCCCEEEECCCCCCCCEEECCCCCEEEEECCCEEEECCEEEEEEECCCCCC >Mature Secondary Structure SVLDRFEKSVEGAVNGVFAKFGSKDLQPVDLSSALEREIDAEAMPVGRDRTVAPNEYRF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE KLSTPDFDRIEAWGSETLANELADNLTEYAKSQHYAFVGPVIVIFEEDLDLSKGNFNLTS EECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCEEEC ESVQGNAVPVTTDAQTEDSPVLEVNGNQYLLTKDKTVIGRGSGCDIVIDDPGISRKHLEI CCCCCCEEEEEECCCCCCCCEEEECCCEEEEECCCEEEECCCCCEEEECCCCCCCEEEEE DITDNGVIARDLGSTNGTYVEGHQVPAATLLDGNTITIGRTRILYWASAQAQE EECCCCEEEECCCCCCCCEEECCCCCEEEEECCCEEEECCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA