Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213691004
Identifier: 213691004
GI number: 213691004
Start: 97951
End: 98475
Strand: Reverse
Name: 213691004
Synonym: Blon_0082
Alternate gene names: NA
Gene position: 98475-97951 (Counterclockwise)
Preceding gene: 213691005
Following gene: 213691003
Centisome position: 3.48
GC content: 66.67
Gene sequence:
>525_bases ATGACTGAACTGACATTCGCCCTGCTCAAGTATGGATTCCTGATCCTGCTGTGGATATTCATCTGGCTGGCCGTGCGTTC GCTGCGCAAGGACATCGAGACGTTCAGTCCGCGGCCCTCGCGTGCACGCCGCCGCCGTGAACGTGAAGCGCACAAAACCC AGACCGAGCCGCCGCAGGCGCCGCGCCCGCATCGCGGTTCCCATGCGGGCGCGGCATCCGCCGCTCCGGCGCAGCCCACC CTGCTCGTCATCATCGACGGCCCGCTCGCCGGCAGTTCCGTACCGTTGTCCGACGCCGACATCACGCTCGGGCGCGCCGC CTCGAACACCGTGGTGCTGGACGATGAGTTCGTCTCCTCCCGTCACGCCCGCGTGTACCGTGACATCCGTTCCGGGCAGT GGGCCATCGAGGACCTGAACTCCACCAACGGGACCGTGGTCAACCAGCAGCGCATCAACCGTCCCACCATCCTGCCCGCC CGTATCCCGGTGCGCATCGGCGCCACCACCTTCGAACTGAGGTAG
Upstream 100 bases:
>100_bases TCGACGGCAACACCATCACCATCGGCCGCACCCGCATCCTGTATTGGGCCTCCGCCCAAGCCCAGGAGTAGTCGAGCACA CGCCCGAAAGCCGTCCACCC
Downstream 100 bases:
>100_bases CCGCATGCCAAAATCCGCCGCTTCACAACCGCTGTTCCTGTATTCCACCACGGTGTCCGATGTGGGCACCGTGCGCGCGA ACAACCAGGATTCCTCCTTC
Product: FHA domain containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; Secreted Protein; FHA Domain Protein; FHA-Domain-Containing Protein; Diguanylate Cyclase; Protein Containing Forkhead-Associated Domain
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTELTFALLKYGFLILLWIFIWLAVRSLRKDIETFSPRPSRARRRREREAHKTQTEPPQAPRPHRGSHAGAASAAPAQPT LLVIIDGPLAGSSVPLSDADITLGRAASNTVVLDDEFVSSRHARVYRDIRSGQWAIEDLNSTNGTVVNQQRINRPTILPA RIPVRIGATTFELR
Sequences:
>Translated_174_residues MTELTFALLKYGFLILLWIFIWLAVRSLRKDIETFSPRPSRARRRREREAHKTQTEPPQAPRPHRGSHAGAASAAPAQPT LLVIIDGPLAGSSVPLSDADITLGRAASNTVVLDDEFVSSRHARVYRDIRSGQWAIEDLNSTNGTVVNQQRINRPTILPA RIPVRIGATTFELR >Mature_173_residues TELTFALLKYGFLILLWIFIWLAVRSLRKDIETFSPRPSRARRRREREAHKTQTEPPQAPRPHRGSHAGAASAAPAQPTL LVIIDGPLAGSSVPLSDADITLGRAASNTVVLDDEFVSSRHARVYRDIRSGQWAIEDLNSTNGTVVNQQRINRPTILPAR IPVRIGATTFELR
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19382; Mature: 19251
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTFALLKYGFLILLWIFIWLAVRSLRKDIETFSPRPSRARRRREREAHKTQTEPPQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC PRPHRGSHAGAASAAPAQPTLLVIIDGPLAGSSVPLSDADITLGRAASNTVVLDDEFVSS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEECHHHHHH RHARVYRDIRSGQWAIEDLNSTNGTVVNQQRINRPTILPARIPVRIGATTFELR HHHHHHHHHHCCCEEEEECCCCCCEEECHHHCCCCCEECCCCCEEECCEEEECC >Mature Secondary Structure TELTFALLKYGFLILLWIFIWLAVRSLRKDIETFSPRPSRARRRREREAHKTQTEPPQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC PRPHRGSHAGAASAAPAQPTLLVIIDGPLAGSSVPLSDADITLGRAASNTVVLDDEFVSS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEECHHHHHH RHARVYRDIRSGQWAIEDLNSTNGTVVNQQRINRPTILPARIPVRIGATTFELR HHHHHHHHHHCCCEEEEECCCCCCEEECHHHCCCCCEECCCCCEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA